RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 ARHGEF1Q92888 912 aaKnown RBP22.88■■□□□ 1.25
MRPL28-201ENST00000199706 KCNQ3O43525 872 aa22.87■■□□□ 1.25
MRPL28-201ENST00000199706 NCBP3Q53F19 620 aaKnown RBP22.87■■□□□ 1.25
MRPL28-201ENST00000199706 USP42Q9H9J4 1324 aaKnown RBP22.86■■□□□ 1.25
MRPL28-201ENST00000199706 RFC4P35249 363 aa22.86■■□□□ 1.25
MRPL28-201ENST00000199706 NLGN1Q8N2Q7 840 aa22.86■■□□□ 1.25
MRPL28-201ENST00000199706 THUMPD2Q9BTF0 503 aaKnown RBP22.86■■□□□ 1.25
MRPL28-201ENST00000199706 TRIM35Q9UPQ4 493 aa22.86■■□□□ 1.25
MRPL28-201ENST00000199706 ZBTB1Q9Y2K1 713 aa22.86■■□□□ 1.25
MRPL28-201ENST00000199706 COL15A1P39059 1388 aa22.86■■□□□ 1.25
MRPL28-201ENST00000199706 IL6STP40189 918 aaPredicted RBP22.84■■□□□ 1.25
MRPL28-201ENST00000199706 EIF5P55010 431 aaKnown RBP22.84■■□□□ 1.25
MRPL28-201ENST00000199706 SCN7AQ01118 1682 aa22.84■■□□□ 1.25
MRPL28-201ENST00000199706 GYS1P13807 737 aa22.83■■□□□ 1.25
MRPL28-201ENST00000199706 SMIM5Q71RC9 77 aa22.83■■□□□ 1.25
MRPL28-201ENST00000199706 FHDC1Q9C0D6 1143 aaPredicted RBP22.83■■□□□ 1.25
MRPL28-201ENST00000199706 RRP7AQ9Y3A4 280 aaKnown RBP22.83■■□□□ 1.25
MRPL28-201ENST00000199706 A0A087WZG4 1122 aa22.82■■□□□ 1.24
MRPL28-201ENST00000199706 EIF4A1P60842 406 aaKnown RBP22.82■■□□□ 1.24
MRPL28-201ENST00000199706 MSL1Q68DK7 614 aa22.82■■□□□ 1.24
MRPL28-201ENST00000199706 KIF13BQ9NQT8 1826 aa22.81■■□□□ 1.24
MRPL28-201ENST00000199706 APAF1O14727 1248 aa22.81■■□□□ 1.24
MRPL28-201ENST00000199706 CALD1Q05682 793 aaKnown RBP22.81■■□□□ 1.24
MRPL28-201ENST00000199706 SYT17Q9BSW7 474 aa22.81■■□□□ 1.24
MRPL28-201ENST00000199706 NARFQ9UHQ1 456 aa22.81■■□□□ 1.24
MRPL28-201ENST00000199706 CHL1O00533 1208 aa22.8■■□□□ 1.24
MRPL28-201ENST00000199706 GIGYF1O75420 1035 aaPredicted RBP22.8■■□□□ 1.24
MRPL28-201ENST00000199706 MIS18AQ9NYP9 233 aa22.8■■□□□ 1.24
MRPL28-201ENST00000199706 TSPYL4Q9UJ04 414 aa22.8■■□□□ 1.24
MRPL28-201ENST00000199706 BCORQ6W2J9 1755 aa22.79■■□□□ 1.24
MRPL28-201ENST00000199706 RGL2O15211 777 aa22.79■■□□□ 1.24
MRPL28-201ENST00000199706 NEUROD2Q15784 382 aa22.79■■□□□ 1.24
MRPL28-201ENST00000199706 CCDC27Q2M243 656 aa22.79■■□□□ 1.24
MRPL28-201ENST00000199706 CD2APQ9Y5K6 639 aa22.79■■□□□ 1.24
MRPL28-201ENST00000199706 ZPR1O75312 459 aa22.78■■□□□ 1.24
MRPL28-201ENST00000199706 USP16Q9Y5T5 823 aa22.78■■□□□ 1.24
MRPL28-201ENST00000199706 ERBB4Q15303 1308 aa22.78■■□□□ 1.24
MRPL28-201ENST00000199706 MMP10P09238 476 aa22.77■■□□□ 1.24
MRPL28-201ENST00000199706 CANXP27824 592 aaKnown RBP22.77■■□□□ 1.24
MRPL28-201ENST00000199706 CFAP44Q96MT7 982 aa22.77■■□□□ 1.24
MRPL28-201ENST00000199706 PRAMEF22A3QJZ6 481 aa22.75■■□□□ 1.23
MRPL28-201ENST00000199706 A1BGP04217 495 aa22.75■■□□□ 1.23
MRPL28-201ENST00000199706 NGEFQ8N5V2 710 aa22.75■■□□□ 1.23
MRPL28-201ENST00000199706 SRP68Q9UHB9 627 aaKnown RBP22.75■■□□□ 1.23
MRPL28-201ENST00000199706 C10orf71Q711Q0 1435 aa22.74■■□□□ 1.23
MRPL28-201ENST00000199706 NRXN2Q9P2S2 1712 aa22.74■■□□□ 1.23
MRPL28-201ENST00000199706 ZNF853P0CG23 659 aa22.74■■□□□ 1.23
MRPL28-201ENST00000199706 IFT57Q9NWB7 429 aa22.74■■□□□ 1.23
MRPL28-201ENST00000199706 HOXB7P09629 217 aa22.73■■□□□ 1.23
MRPL28-201ENST00000199706 FKBP8Q14318 412 aa22.73■■□□□ 1.23
MRPL28-201ENST00000199706 USPL1Q5W0Q7 1092 aa22.73■■□□□ 1.23
MRPL28-201ENST00000199706 NPM2Q86SE8 214 aaKnown RBP22.73■■□□□ 1.23
MRPL28-201ENST00000199706 NBPF26B4DH59 902 aa22.71■■□□□ 1.23
MRPL28-201ENST00000199706 CCER2I3L3R5 266 aa22.71■■□□□ 1.23
MRPL28-201ENST00000199706 TM4SF1P30408 202 aa22.71■■□□□ 1.23
MRPL28-201ENST00000199706 GNAI1P63096 354 aa22.71■■□□□ 1.23
MRPL28-201ENST00000199706 NBPF10Q6P3W6 841 aaKnown RBP22.71■■□□□ 1.23
MRPL28-201ENST00000199706 NBPF15Q8N660 670 aa22.71■■□□□ 1.23
MRPL28-201ENST00000199706 BCL2L12Q9HB09 334 aa22.71■■□□□ 1.23
MRPL28-201ENST00000199706 PARP3Q9Y6F1 533 aa22.71■■□□□ 1.23
MRPL28-201ENST00000199706 KIAA1551Q9HCM1 1747 aa22.7■■□□□ 1.22
MRPL28-201ENST00000199706 AFDNP55196 1824 aaKnown RBP22.69■■□□□ 1.22
MRPL28-201ENST00000199706 IL16Q14005 1332 aa22.69■■□□□ 1.22
MRPL28-201ENST00000199706 CLEC4GQ6UXB4 293 aa22.69■■□□□ 1.22
MRPL28-201ENST00000199706 DCAF8L1A6NGE4 600 aa22.68■■□□□ 1.22
MRPL28-201ENST00000199706 POLRMTO00411 1230 aaKnown RBP22.68■■□□□ 1.22
MRPL28-201ENST00000199706 CAMTA2O94983 1202 aa22.68■■□□□ 1.22
MRPL28-201ENST00000199706 DDR1Q08345 913 aa22.68■■□□□ 1.22
MRPL28-201ENST00000199706 NFIXQ14938 502 aa22.67■■□□□ 1.22
MRPL28-201ENST00000199706 DZIP3Q86Y13 1208 aaKnown RBP22.67■■□□□ 1.22
MRPL28-201ENST00000199706 WWC1Q8IX03 1113 aa22.67■■□□□ 1.22
MRPL28-201ENST00000199706 MBIPQ9NS73 344 aa22.67■■□□□ 1.22
MRPL28-201ENST00000199706 GOLGB1Q14789 3259 aaKnown RBP22.67■■□□□ 1.22
MRPL28-201ENST00000199706 NLGN2Q8NFZ4 835 aa22.66■■□□□ 1.22
MRPL28-201ENST00000199706 ZNF652Q9Y2D9 606 aa22.66■■□□□ 1.22
MRPL28-201ENST00000199706 KLHL34Q8N239 644 aa22.65■■□□□ 1.22
MRPL28-201ENST00000199706 TBC1D2BQ9UPU7 963 aa22.65■■□□□ 1.22
MRPL28-201ENST00000199706 ZNF330Q9Y3S2 320 aaPredicted RBP22.65■■□□□ 1.22
MRPL28-201ENST00000199706 PXDNLA1KZ92 1463 aa22.65■■□□□ 1.22
MRPL28-201ENST00000199706 BRCA1P38398 1863 aaKnown RBP22.64■■□□□ 1.22
MRPL28-201ENST00000199706 CARMIL3Q8ND23 1372 aa22.64■■□□□ 1.22
MRPL28-201ENST00000199706 TGFB2P61812 414 aa22.64■■□□□ 1.21
MRPL28-201ENST00000199706 LAS1LQ9Y4W2 734 aaKnown RBP22.64■■□□□ 1.21
MRPL28-201ENST00000199706 ERVV-1B6SEH8 477 aa22.63■■□□□ 1.21
MRPL28-201ENST00000199706 LRP10Q7Z4F1 713 aa22.63■■□□□ 1.21
MRPL28-201ENST00000199706 CHMP4AQ9BY43 222 aa22.63■■□□□ 1.21
MRPL28-201ENST00000199706 NUP98P52948 1817 aa22.62■■□□□ 1.21
MRPL28-201ENST00000199706 PIP4K2AP48426 406 aaPredicted RBP22.62■■□□□ 1.21
MRPL28-201ENST00000199706 WDR63Q8IWG1 891 aa22.62■■□□□ 1.21
MRPL28-201ENST00000199706 FAM9BQ8IZU0 186 aa22.62■■□□□ 1.21
MRPL28-201ENST00000199706 ATP10DQ9P241 1426 aa22.62■■□□□ 1.21
MRPL28-201ENST00000199706 PDIA6Q15084 440 aa22.61■■□□□ 1.21
MRPL28-201ENST00000199706 UTRNP46939 3433 aa22.6■■□□□ 1.21
MRPL28-201ENST00000199706 TBC1D9BQ66K14 1250 aa22.6■■□□□ 1.21
MRPL28-201ENST00000199706 DDX21Q9NR30 783 aaKnown RBP eCLIP22.6■■□□□ 1.21
MRPL28-201ENST00000199706 DLEC1Q9Y238 1755 aa22.6■■□□□ 1.21
MRPL28-201ENST00000199706 MAP3K15Q6ZN16 1313 aa22.59■■□□□ 1.21
MRPL28-201ENST00000199706 CHD4Q14839 1912 aa22.59■■□□□ 1.21
MRPL28-201ENST00000199706 SERPINB2P05120 415 aa22.59■■□□□ 1.21
MRPL28-201ENST00000199706 DUSP27Q5VZP5 1158 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms