RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 VPS72Q15906 364 aa12.48□□□□□ -0.41
CHERP-201ENST00000198939 PPP4R3BQ5MIZ7 849 aa12.48□□□□□ -0.41
CHERP-201ENST00000198939 TSR2Q969E8 191 aaKnown RBP12.48□□□□□ -0.41
CHERP-201ENST00000198939 TATP17735 454 aaPredicted RBP12.48□□□□□ -0.41
CHERP-201ENST00000198939 BMP2KLQ5H9B9 411 aa12.48□□□□□ -0.41
CHERP-201ENST00000198939 LTN1O94822 1766 aa12.48□□□□□ -0.41
CHERP-201ENST00000198939 EYA1Q99502 592 aa12.47□□□□□ -0.41
CHERP-201ENST00000198939 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
CHERP-201ENST00000198939 CRB1P82279 1406 aa12.47□□□□□ -0.41
CHERP-201ENST00000198939 AFF2P51816 1311 aa12.47□□□□□ -0.41
CHERP-201ENST00000198939 NUCB1Q02818 461 aa12.47□□□□□ -0.41
CHERP-201ENST00000198939 EXOSC9Q06265 439 aaKnown RBP12.47□□□□□ -0.41
CHERP-201ENST00000198939 AMOTQ4VCS5 1084 aa12.47□□□□□ -0.41
CHERP-201ENST00000198939 LMBRD1Q9NUN5 540 aa12.47□□□□□ -0.41
CHERP-201ENST00000198939 IGSF1Q8N6C5 1336 aa12.47□□□□□ -0.41
CHERP-201ENST00000198939 KIF20AO95235 890 aa12.47□□□□□ -0.41
CHERP-201ENST00000198939 ZSCAN20P17040 1043 aaPredicted RBP12.47□□□□□ -0.41
CHERP-201ENST00000198939 SULT6B1Q6IMI4 303 aa12.47□□□□□ -0.41
CHERP-201ENST00000198939 LRSAM1Q6UWE0 723 aa12.47□□□□□ -0.41
CHERP-201ENST00000198939 MYRIPQ8NFW9 859 aa12.47□□□□□ -0.41
CHERP-201ENST00000198939 NOB1Q9ULX3 412 aaKnown RBP12.47□□□□□ -0.41
CHERP-201ENST00000198939 SLIT2O94813 1529 aa12.47□□□□□ -0.41
CHERP-201ENST00000198939 COL5A2P05997 1499 aaPredicted RBP12.47□□□□□ -0.41
CHERP-201ENST00000198939 RABEP1Q15276 862 aa12.47□□□□□ -0.41
CHERP-201ENST00000198939 PLEKHO1Q53GL0 409 aaPredicted RBP12.47□□□□□ -0.41
CHERP-201ENST00000198939 TBC1D9Q6ZT07 1266 aa12.47□□□□□ -0.41
CHERP-201ENST00000198939 TMEM57Q8N5G2 664 aa12.47□□□□□ -0.41
CHERP-201ENST00000198939 TSC1Q92574 1164 aa12.47□□□□□ -0.41
CHERP-201ENST00000198939 KIF3AQ9Y496 699 aa12.47□□□□□ -0.41
CHERP-201ENST00000198939 LETM1O95202 739 aaPredicted RBP12.46□□□□□ -0.41
CHERP-201ENST00000198939 ILDR1Q86SU0 546 aaPredicted RBP12.46□□□□□ -0.41
CHERP-201ENST00000198939 BCL11BQ9C0K0 894 aaPredicted RBP12.46□□□□□ -0.41
CHERP-201ENST00000198939 PRIMPOLQ96LW4 560 aa12.46□□□□□ -0.42
CHERP-201ENST00000198939 SPG7Q9UQ90 795 aa12.46□□□□□ -0.42
CHERP-201ENST00000198939 ST18O60284 1047 aa12.45□□□□□ -0.42
CHERP-201ENST00000198939 SYAP1Q96A49 352 aaPredicted RBP12.45□□□□□ -0.42
CHERP-201ENST00000198939 CAMTA1Q9Y6Y1 1673 aa12.45□□□□□ -0.42
CHERP-201ENST00000198939 CDC45O75419 566 aa12.45□□□□□ -0.42
CHERP-201ENST00000198939 NBPF6Q5VWK0 638 aa12.45□□□□□ -0.42
CHERP-201ENST00000198939 SSH1Q8WYL5 1049 aa12.45□□□□□ -0.42
CHERP-201ENST00000198939 NBPF4Q96M43 638 aa12.45□□□□□ -0.42
CHERP-201ENST00000198939 COL3A1P02461 1466 aaPredicted RBP12.45□□□□□ -0.42
CHERP-201ENST00000198939 LARP1Q6PKG0 1096 aaKnown RBP12.45□□□□□ -0.42
CHERP-201ENST00000198939 CLEC17AQ6ZS10 378 aa12.45□□□□□ -0.42
CHERP-201ENST00000198939 PLCD3Q8N3E9 789 aa12.45□□□□□ -0.42
CHERP-201ENST00000198939 CWC22Q9HCG8 908 aaKnown RBP12.45□□□□□ -0.42
CHERP-201ENST00000198939 FAM208AQ9UK61 1670 aaKnown RBP12.45□□□□□ -0.42
CHERP-201ENST00000198939 NWD2Q9ULI1 1742 aa12.45□□□□□ -0.42
CHERP-201ENST00000198939 LRP6O75581 1613 aa12.44□□□□□ -0.42
CHERP-201ENST00000198939 SPDYE4A6NLX3 237 aa12.44□□□□□ -0.42
CHERP-201ENST00000198939 IL2RBP14784 551 aa12.44□□□□□ -0.42
CHERP-201ENST00000198939 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.44□□□□□ -0.42
CHERP-201ENST00000198939 CT47B1P0C2W7 299 aaPredicted RBP12.44□□□□□ -0.42
CHERP-201ENST00000198939 KIF2CQ99661 725 aa12.44□□□□□ -0.42
CHERP-201ENST00000198939 TSPY26PQ9H489 355 aa12.44□□□□□ -0.42
CHERP-201ENST00000198939 QTRT2Q9H974 415 aaKnown RBP12.44□□□□□ -0.42
CHERP-201ENST00000198939 MBD3O95983 291 aa12.44□□□□□ -0.42
CHERP-201ENST00000198939 LMOD3Q0VAK6 560 aa12.44□□□□□ -0.42
CHERP-201ENST00000198939 BARGINQ6ZT62 677 aa12.44□□□□□ -0.42
CHERP-201ENST00000198939 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.44□□□□□ -0.427e-10■□□□□ 10.3
CHERP-201ENST00000198939 LMO7Q8WWI1 1683 aa12.44□□□□□ -0.42
CHERP-201ENST00000198939 PEAK1Q9H792 1746 aa12.43□□□□□ -0.42
CHERP-201ENST00000198939 SPATA31A5Q5VU36 1347 aa12.43□□□□□ -0.42
CHERP-201ENST00000198939 SPATA31A7Q8IWB4 1347 aa12.43□□□□□ -0.42
CHERP-201ENST00000198939 PDCL2Q8N4E4 241 aa12.43□□□□□ -0.42
CHERP-201ENST00000198939 COL18A1P39060 1754 aa12.43□□□□□ -0.42
CHERP-201ENST00000198939 FAM177BA6PVY3 158 aa12.43□□□□□ -0.42
CHERP-201ENST00000198939 HMOX1P09601 288 aa12.43□□□□□ -0.42
CHERP-201ENST00000198939 FOXD4L6Q3SYB3 417 aaPredicted RBP12.43□□□□□ -0.42
CHERP-201ENST00000198939 FOXD4L3Q6VB84 417 aaPredicted RBP12.43□□□□□ -0.42
CHERP-201ENST00000198939 CFAP44Q96MT7 982 aa12.43□□□□□ -0.42
CHERP-201ENST00000198939 CHMP4BQ9H444 224 aaKnown RBP12.43□□□□□ -0.42
CHERP-201ENST00000198939 SPATA31A1Q5TZJ5 1347 aa12.43□□□□□ -0.42
CHERP-201ENST00000198939 NCBP3Q53F19 620 aaKnown RBP12.43□□□□□ -0.42
CHERP-201ENST00000198939 PRKAR2BP31323 418 aa12.42□□□□□ -0.42
CHERP-201ENST00000198939 CASC1Q6TDU7 716 aa12.42□□□□□ -0.42
CHERP-201ENST00000198939 JARID2Q92833 1246 aaPredicted RBP12.42□□□□□ -0.42
CHERP-201ENST00000198939 KDRP35968 1356 aa12.42□□□□□ -0.42
CHERP-201ENST00000198939 NOLC1Q14978 699 aaKnown RBP eCLIP12.42□□□□□ -0.42
CHERP-201ENST00000198939 GJD4Q96KN9 370 aaPredicted RBP12.42□□□□□ -0.42
CHERP-201ENST00000198939 ZNF830Q96NB3 372 aaPredicted RBP12.42□□□□□ -0.42
CHERP-201ENST00000198939 ZBTB40Q9NUA8 1239 aa12.42□□□□□ -0.42
CHERP-201ENST00000198939 CGNQ9P2M7 1197 aaKnown RBP12.42□□□□□ -0.42
CHERP-201ENST00000198939 EXOC5O00471 708 aa12.42□□□□□ -0.42
CHERP-201ENST00000198939 C1orf141Q5JVX7 400 aa12.42□□□□□ -0.42
CHERP-201ENST00000198939 TMEM63CQ9P1W3 806 aa12.42□□□□□ -0.42
CHERP-201ENST00000198939 IGSF3O75054 1194 aa12.41□□□□□ -0.42
CHERP-201ENST00000198939 PKP1Q13835 747 aa12.41□□□□□ -0.42
CHERP-201ENST00000198939 DRC7Q8IY82 874 aa12.41□□□□□ -0.42
CHERP-201ENST00000198939 GPT2Q8TD30 523 aa12.41□□□□□ -0.42
CHERP-201ENST00000198939 GCC1Q96CN9 775 aa12.41□□□□□ -0.42
CHERP-201ENST00000198939 PHF14O94880 888 aa12.41□□□□□ -0.42
CHERP-201ENST00000198939 PDIA4P13667 645 aaKnown RBP12.41□□□□□ -0.42
CHERP-201ENST00000198939 RBM6P78332 1123 aaKnown RBP12.41□□□□□ -0.42
CHERP-201ENST00000198939 CCDC27Q2M243 656 aa12.41□□□□□ -0.42
CHERP-201ENST00000198939 BCL9LQ86UU0 1499 aa12.41□□□□□ -0.42
CHERP-201ENST00000198939 A0A0G2JS52 829 aa12.4□□□□□ -0.42
CHERP-201ENST00000198939 RTF1Q92541 710 aaKnown RBP12.4□□□□□ -0.42
CHERP-201ENST00000198939 PLCH1Q4KWH8 1693 aa12.4□□□□□ -0.42
CHERP-201ENST00000198939 ZCRB1Q8TBF4 217 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms