RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ATP10DQ9P241 1426 aa24.76■■□□□ 1.55
TNFRSF1A-201ENST00000162749 PDIA6Q15084 440 aa24.76■■□□□ 1.55
TNFRSF1A-201ENST00000162749 C8orf37Q96NL8 207 aa24.76■■□□□ 1.55
TNFRSF1A-201ENST00000162749 DDX21Q9NR30 783 aaKnown RBP eCLIP24.76■■□□□ 1.55
TNFRSF1A-201ENST00000162749 RGS3P49796 1198 aa24.75■■□□□ 1.55
TNFRSF1A-201ENST00000162749 SIRT2Q8IXJ6 389 aa24.75■■□□□ 1.55
TNFRSF1A-201ENST00000162749 SMC5Q8IY18 1101 aa24.75■■□□□ 1.55
TNFRSF1A-201ENST00000162749 SPATA31A6Q5VVP1 1343 aa24.75■■□□□ 1.55
TNFRSF1A-201ENST00000162749 BCL9LQ86UU0 1499 aa24.75■■□□□ 1.55
TNFRSF1A-201ENST00000162749 HYPKQ9NX55 129 aa24.74■■□□□ 1.55
TNFRSF1A-201ENST00000162749 USP16Q9Y5T5 823 aa24.74■■□□□ 1.55
TNFRSF1A-201ENST00000162749 PI4KAP2A4QPH2 592 aa24.74■■□□□ 1.55
TNFRSF1A-201ENST00000162749 UNC5CLQ8IV45 518 aa24.74■■□□□ 1.55
TNFRSF1A-201ENST00000162749 PI4KAP1Q8N8J0 262 aa24.74■■□□□ 1.55
TNFRSF1A-201ENST00000162749 TMOD3Q9NYL9 352 aa24.74■■□□□ 1.55
TNFRSF1A-201ENST00000162749 ADCY9O60503 1353 aa24.73■■□□□ 1.55
TNFRSF1A-201ENST00000162749 NGLY1Q96IV0 654 aa24.73■■□□□ 1.55
TNFRSF1A-201ENST00000162749 PDZRN3Q9UPQ7 1066 aa24.73■■□□□ 1.55
TNFRSF1A-201ENST00000162749 DOT1LQ8TEK3 1739 aa24.73■■□□□ 1.55
TNFRSF1A-201ENST00000162749 PDE4AP27815 886 aa24.72■■□□□ 1.55
TNFRSF1A-201ENST00000162749 CCDC9Q9Y3X0 531 aaKnown RBP24.72■■□□□ 1.55
TNFRSF1A-201ENST00000162749 DNAAF4Q8WXU2 420 aa24.71■■□□□ 1.55
TNFRSF1A-201ENST00000162749 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.71■■□□□ 1.55
TNFRSF1A-201ENST00000162749 DDB1Q16531 1140 aa24.71■■□□□ 1.55
TNFRSF1A-201ENST00000162749 BARGINQ6ZT62 677 aa24.71■■□□□ 1.55
TNFRSF1A-201ENST00000162749 HSPA1LP34931 641 aa24.7■■□□□ 1.55
TNFRSF1A-201ENST00000162749 PIGBQ92521 554 aa24.7■■□□□ 1.54
TNFRSF1A-201ENST00000162749 BACH2Q9BYV9 841 aa24.7■■□□□ 1.54
TNFRSF1A-201ENST00000162749 FNBP4Q8N3X1 1017 aaPredicted RBP24.69■■□□□ 1.54
TNFRSF1A-201ENST00000162749 BCL9O00512 1426 aa24.68■■□□□ 1.54
TNFRSF1A-201ENST00000162749 PTCD1O75127 700 aaKnown RBP24.68■■□□□ 1.54
TNFRSF1A-201ENST00000162749 CEP85Q6P2H3 762 aa24.68■■□□□ 1.54
TNFRSF1A-201ENST00000162749 LRP10Q7Z4F1 713 aa24.68■■□□□ 1.54
TNFRSF1A-201ENST00000162749 MYL6BP14649 208 aa24.67■■□□□ 1.54
TNFRSF1A-201ENST00000162749 BEND3Q5T5X7 828 aa24.67■■□□□ 1.54
TNFRSF1A-201ENST00000162749 KSR2Q6VAB6 950 aa24.67■■□□□ 1.54
TNFRSF1A-201ENST00000162749 ANKRD44Q8N8A2 993 aa24.67■■□□□ 1.54
TNFRSF1A-201ENST00000162749 SRCIN1Q9C0H9 1055 aa24.67■■□□□ 1.54
TNFRSF1A-201ENST00000162749 RPAP2Q8IXW5 612 aaPredicted RBP24.67■■□□□ 1.54
TNFRSF1A-201ENST00000162749 USP44Q9H0E7 712 aa24.67■■□□□ 1.54
TNFRSF1A-201ENST00000162749 VPS72Q15906 364 aa24.66■■□□□ 1.54
TNFRSF1A-201ENST00000162749 MAP3K2Q9Y2U5 619 aa24.66■■□□□ 1.54
TNFRSF1A-201ENST00000162749 GNAI3P08754 354 aa24.66■■□□□ 1.54
TNFRSF1A-201ENST00000162749 GCC1Q96CN9 775 aa24.66■■□□□ 1.54
TNFRSF1A-201ENST00000162749 ASAP1Q9ULH1 1129 aa24.66■■□□□ 1.54
TNFRSF1A-201ENST00000162749 AIMP1Q12904 312 aaKnown RBP24.65■■□□□ 1.54
TNFRSF1A-201ENST00000162749 GNAI2P04899 355 aa24.65■■□□□ 1.54
TNFRSF1A-201ENST00000162749 ANP32AP39687 249 aaKnown RBP24.65■■□□□ 1.54
TNFRSF1A-201ENST00000162749 PIP4K2AP48426 406 aaPredicted RBP24.65■■□□□ 1.54
TNFRSF1A-201ENST00000162749 DDX58O95786 925 aaKnown RBP24.64■■□□□ 1.54
TNFRSF1A-201ENST00000162749 ARFGEF2Q9Y6D5 1785 aa24.64■■□□□ 1.53
TNFRSF1A-201ENST00000162749 ERICH6Q7L0X2 663 aa24.63■■□□□ 1.53
TNFRSF1A-201ENST00000162749 ATG3Q9NT62 314 aa24.63■■□□□ 1.53
TNFRSF1A-201ENST00000162749 NUCB1Q02818 461 aa24.63■■□□□ 1.53
TNFRSF1A-201ENST00000162749 MARCH10Q8NA82 808 aaPredicted RBP24.63■■□□□ 1.53
TNFRSF1A-201ENST00000162749 XAGE3Q8WTP9 111 aa24.63■■□□□ 1.53
TNFRSF1A-201ENST00000162749 ERBB4Q15303 1308 aa24.63■■□□□ 1.53
TNFRSF1A-201ENST00000162749 COPS6Q7L5N1 327 aa24.62■■□□□ 1.53
TNFRSF1A-201ENST00000162749 IPO9Q96P70 1041 aaKnown RBP24.62■■□□□ 1.53
TNFRSF1A-201ENST00000162749 FAM98CQ17RN3 349 aaKnown RBP24.62■■□□□ 1.53
TNFRSF1A-201ENST00000162749 USP21Q9UK80 565 aa24.62■■□□□ 1.53
TNFRSF1A-201ENST00000162749 SYTL4Q96C24 671 aaPredicted RBP24.61■■□□□ 1.53
TNFRSF1A-201ENST00000162749 NOP58Q9Y2X3 529 aaKnown RBP24.61■■□□□ 1.53
TNFRSF1A-201ENST00000162749 NBPF26B4DH59 902 aa24.6■■□□□ 1.53
TNFRSF1A-201ENST00000162749 UBTFL1P0CB47 393 aaPredicted RBP24.6■■□□□ 1.53
TNFRSF1A-201ENST00000162749 PRIM1P49642 420 aaKnown RBP24.6■■□□□ 1.53
TNFRSF1A-201ENST00000162749 NBPF14Q5TI25 921 aa24.6■■□□□ 1.53
TNFRSF1A-201ENST00000162749 NBPF10Q6P3W6 841 aaKnown RBP24.6■■□□□ 1.53
TNFRSF1A-201ENST00000162749 NBPF15Q8N660 670 aa24.6■■□□□ 1.53
TNFRSF1A-201ENST00000162749 DCTPP1Q9H773 170 aa24.6■■□□□ 1.53
TNFRSF1A-201ENST00000162749 CHD1LQ86WJ1 897 aa24.59■■□□□ 1.53
TNFRSF1A-201ENST00000162749 VSIG10Q8N0Z9 540 aa24.59■■□□□ 1.53
TNFRSF1A-201ENST00000162749 LRRFIP2Q9Y608 721 aaKnown RBP24.59■■□□□ 1.53
TNFRSF1A-201ENST00000162749 AFDNP55196 1824 aaKnown RBP24.59■■□□□ 1.53
TNFRSF1A-201ENST00000162749 NBPF7P0C2Y1 421 aaPredicted RBP24.58■■□□□ 1.53
TNFRSF1A-201ENST00000162749 RIC3Q7Z5B4 369 aa24.58■■□□□ 1.53
TNFRSF1A-201ENST00000162749 ALDH1L1O75891 902 aa24.58■■□□□ 1.52
TNFRSF1A-201ENST00000162749 LINS1Q8NG48 757 aa24.58■■□□□ 1.52
TNFRSF1A-201ENST00000162749 LNPKQ9C0E8 428 aa24.58■■□□□ 1.52
TNFRSF1A-201ENST00000162749 NUP188Q5SRE5 1749 aa24.57■■□□□ 1.52
TNFRSF1A-201ENST00000162749 A1BGP04217 495 aa24.57■■□□□ 1.52
TNFRSF1A-201ENST00000162749 CWF19L2Q2TBE0 894 aaKnown RBP24.57■■□□□ 1.52
TNFRSF1A-201ENST00000162749 ANKRD45Q5TZF3 282 aa24.57■■□□□ 1.52
TNFRSF1A-201ENST00000162749 ANKRD13DQ6ZTN6 518 aa24.57■■□□□ 1.52
TNFRSF1A-201ENST00000162749 HMMRO75330 724 aa24.57■■□□□ 1.52
TNFRSF1A-201ENST00000162749 THSD7AQ9UPZ6 1657 aa24.56■■□□□ 1.52
TNFRSF1A-201ENST00000162749 MEX3CQ5U5Q3 659 aaKnown RBP24.56■■□□□ 1.52
TNFRSF1A-201ENST00000162749 RBM42Q9BTD8 480 aaKnown RBP24.55■■□□□ 1.52
TNFRSF1A-201ENST00000162749 TJP1Q07157 1748 aa24.55■■□□□ 1.52
TNFRSF1A-201ENST00000162749 FAM161AQ3B820 660 aa24.55■■□□□ 1.52
TNFRSF1A-201ENST00000162749 C8orf34Q49A92 452 aa24.55■■□□□ 1.52
TNFRSF1A-201ENST00000162749 TEX13AQ9BXU3 409 aaPredicted RBP24.54■■□□□ 1.52
TNFRSF1A-201ENST00000162749 PNMA6EA0A0J9YXQ4 647 aa24.54■■□□□ 1.52
TNFRSF1A-201ENST00000162749 IGKV5-2P06315 115 aa24.54■■□□□ 1.52
TNFRSF1A-201ENST00000162749 NPM2Q86SE8 214 aaKnown RBP24.54■■□□□ 1.52
TNFRSF1A-201ENST00000162749 DNAJC10Q8IXB1 793 aa24.54■■□□□ 1.52
TNFRSF1A-201ENST00000162749 ACSBG1Q96GR2 724 aa24.54■■□□□ 1.52
TNFRSF1A-201ENST00000162749 SLC4A9Q96Q91 983 aa24.54■■□□□ 1.52
TNFRSF1A-201ENST00000162749 METTL22Q9BUU2 404 aaPredicted RBP24.54■■□□□ 1.52
TNFRSF1A-201ENST00000162749 ATP8B2P98198 1209 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms