RNA–Protein interactions for RNA: ENSMUST00000187424.1

Msh3-205, Transcript of DNA mismatch repair protein Msh3, mousemouse

TSL 2 BASIC

Gene Msh3, Length 666 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-205ENSMUST00000187424 Clcn1Q64347 994 aa20.72■□□□□ 0.91
Msh3-205ENSMUST00000187424 U2surpQ6NV83 1029 aaKnown RBP20.72■□□□□ 0.91
Msh3-205ENSMUST00000187424 FktnQ8R507 461 aa20.72■□□□□ 0.91
Msh3-205ENSMUST00000187424 Gnai3Q9DC51 354 aa20.72■□□□□ 0.91
Msh3-205ENSMUST00000187424 Col4a5Q63ZW6 1691 aa20.71■□□□□ 0.91
Msh3-205ENSMUST00000187424 Zfp444Q3TDV8 331 aaKnown RBP20.71■□□□□ 0.91
Msh3-205ENSMUST00000187424 Gas2l2Q5SSG4 860 aa20.71■□□□□ 0.91
Msh3-205ENSMUST00000187424 Pdia6Q922R8 440 aaKnown RBP20.71■□□□□ 0.91
Msh3-205ENSMUST00000187424 Pde4dQ01063 747 aa20.69■□□□□ 0.9
Msh3-205ENSMUST00000187424 Cyp2c67Q569X9 491 aa20.69■□□□□ 0.9
Msh3-205ENSMUST00000187424 Ccdc30Q8BVF4 654 aa20.69■□□□□ 0.9
Msh3-205ENSMUST00000187424 Tnnt1O88346 262 aa20.68■□□□□ 0.9
Msh3-205ENSMUST00000187424 Cnnm1Q0GA42 951 aa20.68■□□□□ 0.9
Msh3-205ENSMUST00000187424 Chpf2Q3UU43 768 aa20.68■□□□□ 0.9
Msh3-205ENSMUST00000187424 SnrkQ8VDU5 748 aa20.68■□□□□ 0.9
Msh3-205ENSMUST00000187424 Usp16Q99LG0 825 aa20.68■□□□□ 0.9
Msh3-205ENSMUST00000187424 1700019A02RikA0A087WPV9 146 aa20.67■□□□□ 0.9
Msh3-205ENSMUST00000187424 Prkab2Q6PAM0 271 aa20.67■□□□□ 0.9
Msh3-205ENSMUST00000187424 Slfnl1Q8BHW9 410 aa20.67■□□□□ 0.9
Msh3-205ENSMUST00000187424 Mylk2Q8VCR8 613 aa20.67■□□□□ 0.9
Msh3-205ENSMUST00000187424 RtcbQ99LF4 505 aaKnown RBP20.67■□□□□ 0.9
Msh3-205ENSMUST00000187424 TefQ9JLC6 301 aa20.67■□□□□ 0.9
Msh3-205ENSMUST00000187424 Rbm25B2RY56 838 aaKnown RBP20.66■□□□□ 0.9
Msh3-205ENSMUST00000187424 Atf5O70191 283 aa20.66■□□□□ 0.9
Msh3-205ENSMUST00000187424 GckrQ91X44 587 aa20.66■□□□□ 0.9
Msh3-205ENSMUST00000187424 MetP16056 1379 aa20.65■□□□□ 0.9
Msh3-205ENSMUST00000187424 Bcl2l13P59017 434 aa20.65■□□□□ 0.9
Msh3-205ENSMUST00000187424 Zbtb1Q91VL9 713 aa20.65■□□□□ 0.9
Msh3-205ENSMUST00000187424 Taf7Q9R1C0 341 aa20.65■□□□□ 0.9
Msh3-205ENSMUST00000187424 Fkbp4P30416 458 aa20.64■□□□□ 0.89
Msh3-205ENSMUST00000187424 Flad1Q8R123 492 aa20.64■□□□□ 0.89
Msh3-205ENSMUST00000187424 Cfap70D3YVL2 1141 aa20.63■□□□□ 0.89
Msh3-205ENSMUST00000187424 Gm12185Q5NCB2 835 aa20.63■□□□□ 0.89
Msh3-205ENSMUST00000187424 DiexfQ8BTT6 772 aaKnown RBP20.62■□□□□ 0.89
Msh3-205ENSMUST00000187424 Amhr2Q8K592 568 aa20.62■□□□□ 0.89
Msh3-205ENSMUST00000187424 BcorQ8CGN4 1759 aa20.62■□□□□ 0.89
Msh3-205ENSMUST00000187424 Nedd4P46935 887 aaKnown RBP20.61■□□□□ 0.89
Msh3-205ENSMUST00000187424 NogP97466 232 aa20.61■□□□□ 0.89
Msh3-205ENSMUST00000187424 EgfrQ01279 1210 aa20.61■□□□□ 0.89
Msh3-205ENSMUST00000187424 Ksr2Q3UVC0 959 aa20.61■□□□□ 0.89
Msh3-205ENSMUST00000187424 Slc39a6Q8C145 765 aa20.61■□□□□ 0.89
Msh3-205ENSMUST00000187424 Tmem119Q8R138 280 aa20.61■□□□□ 0.89
Msh3-205ENSMUST00000187424 Q3TQI7 289 aaKnown RBP20.6■□□□□ 0.89
Msh3-205ENSMUST00000187424 Col5a2Q3U962 1497 aa20.6■□□□□ 0.89
Msh3-205ENSMUST00000187424 Akap2O54931 893 aa20.59■□□□□ 0.89
Msh3-205ENSMUST00000187424 Ofd1Q80Z25 1017 aa20.59■□□□□ 0.89
Msh3-205ENSMUST00000187424 Nip7Q9CXK8 180 aaKnown RBP20.59■□□□□ 0.89
Msh3-205ENSMUST00000187424 Ddx60E9PZQ1 1711 aa20.58■□□□□ 0.89
Msh3-205ENSMUST00000187424 Cyp2c68K7N6C2 491 aa20.58■□□□□ 0.89
Msh3-205ENSMUST00000187424 Igfbp6P47880 238 aa20.58■□□□□ 0.89
Msh3-205ENSMUST00000187424 Cers3Q1A3B0 383 aa20.58■□□□□ 0.89
Msh3-205ENSMUST00000187424 SympkQ80X82 1284 aa20.58■□□□□ 0.89
Msh3-205ENSMUST00000187424 Gigyf1Q99MR1 1044 aaKnown RBP20.58■□□□□ 0.89
Msh3-205ENSMUST00000187424 Klrk1O54709 232 aa20.57■□□□□ 0.88
Msh3-205ENSMUST00000187424 Slurp2P0DP59 97 aa20.57■□□□□ 0.88
Msh3-205ENSMUST00000187424 CastP51125 788 aa20.57■□□□□ 0.88
Msh3-205ENSMUST00000187424 Lrrc43Q3V0L5 667 aa20.57■□□□□ 0.88
Msh3-205ENSMUST00000187424 Pcgf6Q99NA9 353 aa20.57■□□□□ 0.88
Msh3-205ENSMUST00000187424 Vamp4O70480 141 aa20.56■□□□□ 0.88
Msh3-205ENSMUST00000187424 Anks4bQ8K3X6 423 aa20.56■□□□□ 0.88
Msh3-205ENSMUST00000187424 HmcesQ8R1M0 353 aaKnown RBP20.56■□□□□ 0.88
Msh3-205ENSMUST00000187424 Sipa1l3G3X9J0 1776 aa20.56■□□□□ 0.88
Msh3-205ENSMUST00000187424 ArsiQ32KI9 573 aa20.55■□□□□ 0.88
Msh3-205ENSMUST00000187424 TrhQ62361 256 aa20.55■□□□□ 0.88
Msh3-205ENSMUST00000187424 Srp68Q8BMA6 625 aaKnown RBP20.55■□□□□ 0.88
Msh3-205ENSMUST00000187424 IarsQ8BU30 1262 aa20.55■□□□□ 0.88
Msh3-205ENSMUST00000187424 Trip6Q9Z1Y4 480 aa20.55■□□□□ 0.88
Msh3-205ENSMUST00000187424 Zfp646Q6NV66 1788 aa20.54■□□□□ 0.88
Msh3-205ENSMUST00000187424 NudcO35685 332 aaKnown RBP20.54■□□□□ 0.88
Msh3-205ENSMUST00000187424 PsapQ61207 557 aaKnown RBP20.54■□□□□ 0.88
Msh3-205ENSMUST00000187424 Upf1Q9EPU0 1124 aaKnown RBP20.53■□□□□ 0.88
Msh3-205ENSMUST00000187424 Erbb4Q61527 1308 aa20.53■□□□□ 0.88
Msh3-205ENSMUST00000187424 Prr5lA2AVJ5 370 aa20.52■□□□□ 0.88
Msh3-205ENSMUST00000187424 Atp1b3P97370 278 aa20.52■□□□□ 0.88
Msh3-205ENSMUST00000187424 B4galnt4Q766D5 1034 aa20.52■□□□□ 0.88
Msh3-205ENSMUST00000187424 Trim52Q8CDV4 233 aa20.52■□□□□ 0.88
Msh3-205ENSMUST00000187424 Lama4P97927 1816 aa20.52■□□□□ 0.88
Msh3-205ENSMUST00000187424 Strn4P58404 760 aa20.51■□□□□ 0.87
Msh3-205ENSMUST00000187424 Stxbp5lQ5DQR4 1185 aa20.51■□□□□ 0.87
Msh3-205ENSMUST00000187424 Nop58Q6DFW4 536 aaKnown RBP20.51■□□□□ 0.87
Msh3-205ENSMUST00000187424 Trim26Q99PN3 545 aa20.51■□□□□ 0.87
Msh3-205ENSMUST00000187424 Kank1E9Q238 1360 aa20.5■□□□□ 0.87
Msh3-205ENSMUST00000187424 Ttll7A4Q9F0 912 aa20.5■□□□□ 0.87
Msh3-205ENSMUST00000187424 VwdeQ6DFV8 926 aa20.5■□□□□ 0.87
Msh3-205ENSMUST00000187424 Tango6Q8C3S2 1079 aa20.5■□□□□ 0.87
Msh3-205ENSMUST00000187424 Ccar1Q8CH18 1146 aaKnown RBP20.5■□□□□ 0.87
Msh3-205ENSMUST00000187424 Dpf1Q9QX66 387 aa20.5■□□□□ 0.87
Msh3-205ENSMUST00000187424 Ubn2Q80WC1 1314 aa20.5■□□□□ 0.87
Msh3-205ENSMUST00000187424 Plekhh1Q80TI1 1356 aa20.49■□□□□ 0.87
Msh3-205ENSMUST00000187424 Cnksr1A2A9K7 700 aa20.49■□□□□ 0.87
Msh3-205ENSMUST00000187424 Lmnb1P14733 588 aaKnown RBP20.49■□□□□ 0.87
Msh3-205ENSMUST00000187424 KarsQ99MN1 595 aaKnown RBP20.49■□□□□ 0.87
Msh3-205ENSMUST00000187424 Tktl2Q9D4D4 627 aa20.49■□□□□ 0.87
Msh3-205ENSMUST00000187424 Rapgef4Q9EQZ6 1011 aa20.49■□□□□ 0.87
Msh3-205ENSMUST00000187424 Gm6268A2A3U9 297 aa20.48■□□□□ 0.87
Msh3-205ENSMUST00000187424 Pde3aQ9Z0X4 1141 aa20.48■□□□□ 0.87
Msh3-205ENSMUST00000187424 Ambra1A2AH22 1300 aa20.48■□□□□ 0.87
Msh3-205ENSMUST00000187424 Aplp1Q03157 653 aa20.47■□□□□ 0.87
Msh3-205ENSMUST00000187424 Morc2aQ69ZX6 1030 aa20.47■□□□□ 0.87
Msh3-205ENSMUST00000187424 Nsfl1cQ9CZ44 370 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms