RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Tktl2Q9D4D4 627 aa20.11■□□□□ 0.81
Hmgb1-208ENSMUST00000139443 TrhQ62361 256 aa20.1■□□□□ 0.81
Hmgb1-208ENSMUST00000139443 Senp3Q9EP97 568 aaKnown RBP20.1■□□□□ 0.81
Hmgb1-208ENSMUST00000139443 Uhrf1bp1B2KF50 1429 aa20.1■□□□□ 0.81
Hmgb1-208ENSMUST00000139443 Lama4P97927 1816 aa20.09■□□□□ 0.81
Hmgb1-208ENSMUST00000139443 StrcQ8VIM6 1809 aa20.09■□□□□ 0.81
Hmgb1-208ENSMUST00000139443 1700019A02RikA0A087WPV9 146 aa20.09■□□□□ 0.81
Hmgb1-208ENSMUST00000139443 Fkbp4P30416 458 aa20.09■□□□□ 0.81
Hmgb1-208ENSMUST00000139443 U2surpQ6NV83 1029 aaKnown RBP20.09■□□□□ 0.81
Hmgb1-208ENSMUST00000139443 Ddx60E9PZQ1 1711 aa20.08■□□□□ 0.81
Hmgb1-208ENSMUST00000139443 Mrs2Q5NCE8 434 aa20.08■□□□□ 0.81
Hmgb1-208ENSMUST00000139443 FktnQ8R507 461 aa20.08■□□□□ 0.81
Hmgb1-208ENSMUST00000139443 IarsQ8BU30 1262 aa20.07■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 NgdnQ9DB96 315 aaKnown RBP20.07■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Foxp4Q9DBY0 795 aaKnown RBP20.07■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Yy1Q00899 414 aa20.06■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Q3TQI7 289 aaKnown RBP20.06■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Slc39a6Q8C145 765 aa20.06■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Klhdc4Q921I2 584 aa20.06■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Pde3aQ9Z0X4 1141 aa20.06■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Erbb4Q61527 1308 aa20.05■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Chpf2Q3UU43 768 aa20.05■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Gnl3lQ6PGG6 577 aaKnown RBP20.05■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Pdia6Q922R8 440 aaKnown RBP20.05■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Snai1Q02085 264 aa20.04■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 PsapQ61207 557 aaKnown RBP20.04■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Tango6Q8C3S2 1079 aa20.04■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Nlrp3Q8R4B8 1033 aa20.04■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Gnai1B2RSH2 354 aa20.03■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Slurp2P0DP59 97 aa20.03■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Lmnb1P14733 588 aaKnown RBP20.03■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Ifit1bl2Q3U687 466 aa20.03■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Uspl1Q3ULM6 1089 aa20.03■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Gnai3Q9DC51 354 aa20.03■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Dlg5E9Q9R9 1921 aa20.02■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Arid3aQ62431 601 aa20.02■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Cyp2d12Q8BVD2 504 aa20.02■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Spon1Q8VCC9 807 aa20.02■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Col4a1P02463 1669 aa20.02■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Casz1Q9CWL2 1761 aa20.02■□□□□ 0.8
Hmgb1-208ENSMUST00000139443 Ambra1A2AH22 1300 aa20.02■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 SympkQ80X82 1284 aa20.01■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 Q8C6G1 249 aa20.01■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 Frmpd3A0A140LIW3 1774 aa20■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 Nedd4P46935 887 aaKnown RBP20■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 NrdcQ8BHG1 1161 aa20■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 SowahdQ8BY98 327 aa20■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 Trim52Q8CDV4 233 aa20■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 Tmem119Q8R138 280 aa20■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 Ciapin1Q8WTY4 309 aa20■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 St5Q924W7 1134 aa20■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 Mapk8ip1Q9WVI9 707 aa20■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 Pde4bB1AWC9 736 aa19.99■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 B4galnt4Q766D5 1034 aa19.99■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 Trim34aQ99PP6 485 aa19.99■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 Plekhh1Q80TI1 1356 aa19.98■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 Cyp2c68K7N6C2 491 aa19.98■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 Usp16Q99LG0 825 aa19.98■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 Morc2aQ69ZX6 1030 aa19.97■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 Cdc37l1Q9CZP7 335 aa19.97■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 Zc3h12cQ5DTV4 884 aa19.96■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 PrimpolQ6P1E7 537 aa19.96■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 Gimap8Q75N62 688 aa19.96■□□□□ 0.79
Hmgb1-208ENSMUST00000139443 Stox1B2RQL2 990 aa19.95■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Itgb4A2A863 1818 aa19.95■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 CltaO08585 235 aa19.94■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Akap2O54931 893 aa19.94■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Atf5O70191 283 aa19.94■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Ncbp3Q8BZR9 615 aaKnown RBP19.94■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Cyp2c23E9Q5K4 494 aa19.93■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Adgre1Q61549 931 aa19.93■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Ankle2Q6P1H6 964 aa19.93■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Kif13bA0A286YCV9 1847 aa19.92■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Neurod2Q62414 383 aa19.92■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 CrbnQ8C7D2 445 aa19.92■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Cd248Q91V98 765 aa19.92■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Sipa1l3G3X9J0 1776 aa19.91■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 NogP97466 232 aa19.91■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Adam1aQ60813 791 aa19.91■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Fam122aQ9DB52 284 aa19.91■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Ssc5dQ8BV57 1371 aa19.91■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Igf2rQ07113 2483 aaKnown RBP19.91■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Dctn1O08788 1281 aa19.9■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Gja5Q01231 358 aa19.9■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 EgfrQ01279 1210 aa19.9■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Pdzph1Q8BGR1 1238 aa19.9■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Atxn3Q9CVD2 355 aa19.9■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Dbndd1Q9CZ00 160 aa19.9■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Speer4f1Q9D5Q6 258 aa19.9■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Megf6Q80V70 1572 aa19.9■□□□□ 0.78
Hmgb1-208ENSMUST00000139443 Ttll7A4Q9F0 912 aa19.89■□□□□ 0.77
Hmgb1-208ENSMUST00000139443 D830030K20RikE9PYQ5 218 aa19.89■□□□□ 0.77
Hmgb1-208ENSMUST00000139443 Gm3043K7N693 218 aa19.89■□□□□ 0.77
Hmgb1-208ENSMUST00000139443 Gm16440K7N6G6 218 aa19.89■□□□□ 0.77
Hmgb1-208ENSMUST00000139443 Gm2244L7N2A3 218 aa19.89■□□□□ 0.77
Hmgb1-208ENSMUST00000139443 Gm3278L7N2D2 218 aa19.89■□□□□ 0.77
Hmgb1-208ENSMUST00000139443 Gm8271L7N2E2 218 aa19.89■□□□□ 0.77
Hmgb1-208ENSMUST00000139443 Klrk1O54709 232 aa19.89■□□□□ 0.77
Hmgb1-208ENSMUST00000139443 Npy5rO70342 466 aa19.89■□□□□ 0.77
Hmgb1-208ENSMUST00000139443 Rbm5Q91YE7 815 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms