RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Klhl10Q9D5V2 608 aa18.07■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Smtnl1Q99LM3 459 aa18.07■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Cetn2Q9R1K9 172 aa18.07■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Homer1Q9Z2Y3 366 aa18.07■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Zscan29E9Q5B4 869 aa18.07■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Ctr9Q62018 1173 aaKnown RBP18.07■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Ccdc112A0AUP1 442 aa18.06■□□□□ 0.48
Ubr2-201ENSMUST00000113335 LyarQ08288 388 aaKnown RBP18.06■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Ankrd1Q9CR42 319 aa18.06■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Bloc1s2Q9CWG9 143 aa18.06■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Als2cr12Q8BVM7 383 aa18.06■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Tbc1d32Q3URV1 1296 aa18.06■□□□□ 0.48
Ubr2-201ENSMUST00000113335 KdrP35918 1367 aa18.06■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Ercc3P49135 783 aa18.05■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Mrpl44Q9CY73 333 aaKnown RBP18.05■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Usp25P57080 1055 aa18.05■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Skor1Q8BX46 964 aa18.05■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Ctnnbl1Q9CWL8 563 aaKnown RBP18.05■□□□□ 0.48
Ubr2-201ENSMUST00000113335 CebpzP53569 1052 aaKnown RBP18.05■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Q9D5Q8 446 aa18.05■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Gm1043A0A140LJC2 1431 aa18.05■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Ccdc155Q80VJ8 648 aa18.05■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Ano2Q8CFW1 1002 aa18.05■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Baiap2l1Q9DBJ3 514 aa18.05■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Gng11P61953 73 aa18.04■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Ccdc12Q8R344 166 aaKnown RBP18.04■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Lman1Q9D0F3 517 aa18.04■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Soga3Q6NZL0 945 aa18.04■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Ccne1Q61457 408 aa18.04■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Cnga2Q62398 664 aa18.04■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Zbtb3Q91X45 518 aa18.04■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Gjc1P28229 396 aa18.03■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Cacna2d4Q5RJF7 1116 aa18.03■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Tmx1Q8VBT0 278 aa18.03■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Fgd6Q69ZL1 1399 aa18.03■□□□□ 0.48
Ubr2-201ENSMUST00000113335 RalylQ8BTF8 293 aa18.03■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Atf7Q8R0S1 413 aa18.03■□□□□ 0.48
Ubr2-201ENSMUST00000113335 NexmifQ5DTT1 1515 aa18.03■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Ankrd44B2RXR6 993 aa18.03■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Sh3d21Q7TSG5 549 aa18.03■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Smc1aQ9CU62 1233 aaKnown RBP18.03■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Ncoa1P70365 1447 aa18.03■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Nucb2P81117 420 aa18.03■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Ttc21bQ0HA38 1315 aa18.03■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Bms1Q6PGF5 1284 aaKnown RBP18.03■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Mcm10Q0VBD2 885 aa18.02■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Ddx10Q80Y44 875 aaKnown RBP18.02■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Q3UJC8 639 aa18.02■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Hand2Q61039 217 aa18.02■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Kank1E9Q238 1360 aa18.02■□□□□ 0.48
Ubr2-201ENSMUST00000113335 Kcnh5Q920E3 988 aa18.02■□□□□ 0.48
Ubr2-201ENSMUST00000113335 EprsQ8CGC7 1512 aaKnown RBP18.02■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Irf9Q61179 399 aa18.01■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Larp6Q8BN59 492 aa18.01■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Ampd3O08739 766 aa18.01■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Slc7a3P70423 618 aa18.01■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Traf3ip1Q149C2 625 aa18.01■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Ripply1Q2WG77 201 aa18.01■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Naa15Q80UM3 865 aaKnown RBP18.01■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Mtmr3Q8K296 1196 aa18.01■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Sil1Q9EPK6 465 aa18.01■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Chpf2Q3UU43 768 aa18.01■□□□□ 0.47
Ubr2-201ENSMUST00000113335 PtprkP35822 1457 aa18.01■□□□□ 0.47
Ubr2-201ENSMUST00000113335 PogzQ8BZH4 1409 aaKnown RBP18.01■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Cfap73J3QPZ5 306 aa18.01■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Zhx1P70121 873 aa18.01■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Map3k2Q61083 619 aa18.01■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Rnf41Q8BH75 317 aa18.01■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Polr3aB2RXC6 1390 aa18■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Stat1P42225 749 aa18■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Nop53Q8BK35 484 aaKnown RBP18■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Tex19.1Q99MV2 351 aa18■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Gm14025A2AP89 1413 aa18■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Api5O35841 504 aaKnown RBP18■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Znf287Q9EQB9 759 aa18■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Dapk3O54784 448 aa18■□□□□ 0.47
Ubr2-201ENSMUST00000113335 ClasrpQ8CFC7 668 aa18■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Cfap53Q9D439 514 aa18■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Ripk4Q9ERK0 786 aa18■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Serpinb6bO08804 377 aa17.99■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Slc5a1Q8C3K6 665 aa17.99■□□□□ 0.47
Ubr2-201ENSMUST00000113335 LlphQ9D945 130 aaKnown RBP17.99■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Fam177a1Q8BR63 207 aa17.99■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Fam107bQ3TGF2 131 aa17.99■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Tmem87bQ8BKU8 555 aa17.99■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Vps37cQ8R105 352 aa17.99■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Smco2Q9DA21 347 aa17.99■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Duxf3A0A0N4SV92 674 aa17.99■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Tbc1d2bQ3U0J8 965 aa17.99■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Iffo1Q8BXL9 562 aa17.99■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Sugp2Q8CH09 1067 aa17.99■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Rbm19Q8R3C6 952 aaKnown RBP17.99■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Metap2O08663 478 aaKnown RBP17.98■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Smarcc1P97496 1104 aa17.98■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Liat1Q810M6 228 aa17.98■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Vps16Q920Q4 839 aa17.98■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Mcm6P97311 821 aa17.98■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Olr1Q9EQ09 363 aa17.98■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Hdhd2Q3UGR5 259 aa17.98■□□□□ 0.47
Ubr2-201ENSMUST00000113335 Srgap1Q91Z69 1062 aa17.98■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms