RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Zswim4Q8C7B8 1101 aa17.34■□□□□ 0.37
Shank1-202ENSMUST00000107935 Gm3409A0A0G2JE67 319 aa17.34■□□□□ 0.37
Shank1-202ENSMUST00000107935 U2af2P26369 475 aaKnown RBP17.34■□□□□ 0.37
Shank1-202ENSMUST00000107935 Ccdc148Q6P5U8 527 aa17.34■□□□□ 0.37
Shank1-202ENSMUST00000107935 Znf653Q6YND2 615 aa17.34■□□□□ 0.37
Shank1-202ENSMUST00000107935 Puf60Q3UEB3 564 aaKnown RBP17.34■□□□□ 0.37
Shank1-202ENSMUST00000107935 Rassf2Q8BMS9 326 aa17.34■□□□□ 0.37
Shank1-202ENSMUST00000107935 KdrP35918 1367 aa17.34■□□□□ 0.37
Shank1-202ENSMUST00000107935 Mtmr3Q8K296 1196 aa17.33■□□□□ 0.37
Shank1-202ENSMUST00000107935 Ctage5Q8R311 779 aa17.33■□□□□ 0.37
Shank1-202ENSMUST00000107935 EvcP57680 1005 aa17.33■□□□□ 0.36
Shank1-202ENSMUST00000107935 Lman1Q9D0F3 517 aa17.33■□□□□ 0.36
Shank1-202ENSMUST00000107935 Cc2d2bA0A286YDU8 1405 aa17.33■□□□□ 0.36
Shank1-202ENSMUST00000107935 E9QMW4 1145 aa17.33■□□□□ 0.36
Shank1-202ENSMUST00000107935 Syap1Q9D5V6 365 aa17.33■□□□□ 0.36
Shank1-202ENSMUST00000107935 Baiap2l1Q9DBJ3 514 aa17.33■□□□□ 0.36
Shank1-202ENSMUST00000107935 Fyb1O35601 819 aa17.33■□□□□ 0.36
Shank1-202ENSMUST00000107935 Ano6Q6P9J9 911 aa17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Pds5bQ4VA53 1446 aaKnown RBP17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Ift140E9PY46 1464 aa17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Ccdc152E9PX14 254 aa17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Syt1P46096 421 aa17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Snx13Q6PHS6 957 aa17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Hook3Q8BUK6 718 aa17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Camk4P08414 469 aa17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Tsga10Q6NY15 697 aa17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Cep55Q8BT07 462 aa17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Stard3nlQ9DCI3 235 aa17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Clcn1Q64347 994 aa17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Aldh1l1Q8R0Y6 902 aa17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Zscan29E9Q5B4 869 aa17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Top1Q04750 767 aaKnown RBP17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Ankrd40Q5SUE8 363 aa17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Yeats4Q9CR11 227 aaKnown RBP17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Ebag9Q9D0V7 213 aa17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Nap1l5Q9JJF0 156 aa17.32■□□□□ 0.36
Shank1-202ENSMUST00000107935 Lekr1B2RVN1 116 aa17.31■□□□□ 0.36
Shank1-202ENSMUST00000107935 Ddx27Q921N6 760 aaKnown RBP17.31■□□□□ 0.36
Shank1-202ENSMUST00000107935 Speer4aF8VPX6 267 aa17.31■□□□□ 0.36
Shank1-202ENSMUST00000107935 Zfpm1O35615 995 aa17.31■□□□□ 0.36
Shank1-202ENSMUST00000107935 Nsd2Q8BVE8 1365 aa17.31■□□□□ 0.36
Shank1-202ENSMUST00000107935 Rad23bP54728 416 aa17.31■□□□□ 0.36
Shank1-202ENSMUST00000107935 Cnga2Q62398 664 aa17.31■□□□□ 0.36
Shank1-202ENSMUST00000107935 Exoc6bA6H5Z3 810 aa17.31■□□□□ 0.36
Shank1-202ENSMUST00000107935 RpgrQ9R0X5 1001 aa17.31■□□□□ 0.36
Shank1-202ENSMUST00000107935 Myom3A2ABU4 1439 aa17.3■□□□□ 0.36
Shank1-202ENSMUST00000107935 Kdm5dQ62240 1548 aa17.3■□□□□ 0.36
Shank1-202ENSMUST00000107935 Galntl5Q9D4M9 431 aa17.3■□□□□ 0.36
Shank1-202ENSMUST00000107935 SncbQ91ZZ3 133 aa17.3■□□□□ 0.36
Shank1-202ENSMUST00000107935 Gjc1P28229 396 aa17.3■□□□□ 0.36
Shank1-202ENSMUST00000107935 Gsdma2Q32M21 443 aa17.3■□□□□ 0.36
Shank1-202ENSMUST00000107935 Map3k11Q80XI6 850 aa17.3■□□□□ 0.36
Shank1-202ENSMUST00000107935 Phldb1Q6PDH0 1371 aaKnown RBP17.3■□□□□ 0.36
Shank1-202ENSMUST00000107935 Sdad1Q80UZ2 687 aaKnown RBP17.3■□□□□ 0.36
Shank1-202ENSMUST00000107935 Sdccag8Q80UF4 717 aa17.29■□□□□ 0.36
Shank1-202ENSMUST00000107935 Irx4Q9QY61 515 aa17.29■□□□□ 0.36
Shank1-202ENSMUST00000107935 Smarcc2Q6PDG5 1213 aa17.29■□□□□ 0.36
Shank1-202ENSMUST00000107935 Mrpl44Q9CY73 333 aaKnown RBP17.29■□□□□ 0.36
Shank1-202ENSMUST00000107935 Rasal2E9PW37 1286 aa17.29■□□□□ 0.36
Shank1-202ENSMUST00000107935 Cdca8Q8BHX3 289 aa17.29■□□□□ 0.36
Shank1-202ENSMUST00000107935 Pnpla2Q8BJ56 486 aa17.29■□□□□ 0.36
Shank1-202ENSMUST00000107935 Usp11Q99K46 921 aa17.29■□□□□ 0.36
Shank1-202ENSMUST00000107935 Mxra7Q9CZH7 178 aa17.29■□□□□ 0.36
Shank1-202ENSMUST00000107935 Klhl30Q8C3F7 581 aa17.29■□□□□ 0.36
Shank1-202ENSMUST00000107935 Gle1Q8R322 699 aa17.29■□□□□ 0.36
Shank1-202ENSMUST00000107935 Gm28919A0A087WP35 240 aa17.28■□□□□ 0.36
Shank1-202ENSMUST00000107935 Zfp42P22227 288 aa17.28■□□□□ 0.36
Shank1-202ENSMUST00000107935 Fchsd2Q3USJ8 740 aa17.28■□□□□ 0.36
Shank1-202ENSMUST00000107935 PsapQ61207 557 aaKnown RBP17.28■□□□□ 0.36
Shank1-202ENSMUST00000107935 Polr3dQ91WD1 398 aa17.28■□□□□ 0.36
Shank1-202ENSMUST00000107935 Ccdc121E9Q6D3 323 aa17.28■□□□□ 0.36
Shank1-202ENSMUST00000107935 Mcm5P49718 733 aa17.28■□□□□ 0.36
Shank1-202ENSMUST00000107935 Map3k13Q1HKZ5 959 aa17.28■□□□□ 0.36
Shank1-202ENSMUST00000107935 Rab3il1Q8VDV3 383 aa17.28■□□□□ 0.36
Shank1-202ENSMUST00000107935 PpanQ91YU8 470 aaKnown RBP17.28■□□□□ 0.36
Shank1-202ENSMUST00000107935 Srgap1Q91Z69 1062 aa17.28■□□□□ 0.36
Shank1-202ENSMUST00000107935 SfpqQ8VIJ6 699 aaKnown RBP17.28■□□□□ 0.36
Shank1-202ENSMUST00000107935 Ca8P28651 291 aa17.28■□□□□ 0.36
Shank1-202ENSMUST00000107935 Tnip1Q9WUU8 647 aa17.28■□□□□ 0.36
Shank1-202ENSMUST00000107935 Atp1a4Q9WV27 1032 aa17.28■□□□□ 0.36
Shank1-202ENSMUST00000107935 Ces1hD3Z298 562 aa17.27■□□□□ 0.36
Shank1-202ENSMUST00000107935 Agbl1Q09M05 972 aa17.27■□□□□ 0.36
Shank1-202ENSMUST00000107935 Ctnna2Q61301 953 aa17.27■□□□□ 0.36
Shank1-202ENSMUST00000107935 Ankib1Q6ZPS6 1085 aa17.27■□□□□ 0.36
Shank1-202ENSMUST00000107935 ScribQ80U72 1612 aa17.27■□□□□ 0.36
Shank1-202ENSMUST00000107935 Eef1dP57776 281 aaKnown RBP17.27■□□□□ 0.36
Shank1-202ENSMUST00000107935 Spa17Q62252 149 aa17.27■□□□□ 0.36
Shank1-202ENSMUST00000107935 Ddx10Q80Y44 875 aaKnown RBP17.27■□□□□ 0.36
Shank1-202ENSMUST00000107935 Kiaa1524Q8BWY9 907 aa17.27■□□□□ 0.36
Shank1-202ENSMUST00000107935 Dapk3O54784 448 aa17.27■□□□□ 0.36
Shank1-202ENSMUST00000107935 Cbfa2t2O70374 594 aa17.27■□□□□ 0.36
Shank1-202ENSMUST00000107935 Sh3d21Q7TSG5 549 aa17.27■□□□□ 0.36
Shank1-202ENSMUST00000107935 Ampd3O08739 766 aa17.27■□□□□ 0.35
Shank1-202ENSMUST00000107935 Zfp91Q62511 572 aa17.26■□□□□ 0.35
Shank1-202ENSMUST00000107935 Ctdp1Q7TSG2 960 aa17.26■□□□□ 0.35
Shank1-202ENSMUST00000107935 Zkscan5Q9Z1D8 819 aa17.26■□□□□ 0.35
Shank1-202ENSMUST00000107935 Cct2P80314 535 aaKnown RBP17.26■□□□□ 0.35
Shank1-202ENSMUST00000107935 LyarQ08288 388 aaKnown RBP17.26■□□□□ 0.35
Shank1-202ENSMUST00000107935 Mindy4Q3UQI9 744 aa17.26■□□□□ 0.35
Shank1-202ENSMUST00000107935 Dpf1Q9QX66 387 aa17.26■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms