RNA–Protein interactions for RNA: ENSMUST00000073961.7

Ptpre-201, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,410 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-201ENSMUST00000073961 Ncapg2Q6DFV1 1138 aa20.29■□□□□ 0.84
Ptpre-201ENSMUST00000073961 Smtnl1Q99LM3 459 aa20.28■□□□□ 0.84
Ptpre-201ENSMUST00000073961 Kdm4aQ8BW72 1064 aa20.28■□□□□ 0.84
Ptpre-201ENSMUST00000073961 Gm42641I6L9G2 585 aa20.28■□□□□ 0.84
Ptpre-201ENSMUST00000073961 Nucb2P81117 420 aa20.28■□□□□ 0.84
Ptpre-201ENSMUST00000073961 AtripQ8BMG1 785 aa20.28■□□□□ 0.84
Ptpre-201ENSMUST00000073961 Nup133Q8R0G9 1155 aa20.28■□□□□ 0.84
Ptpre-201ENSMUST00000073961 Idi2Q8BFZ6 227 aa20.28■□□□□ 0.84
Ptpre-201ENSMUST00000073961 GphnQ8BUV3 769 aaKnown RBP20.28■□□□□ 0.84
Ptpre-201ENSMUST00000073961 Mtmr3Q8K296 1196 aa20.28■□□□□ 0.84
Ptpre-201ENSMUST00000073961 Znf131Q8K3J5 619 aa20.28■□□□□ 0.84
Ptpre-201ENSMUST00000073961 Mrpl44Q9CY73 333 aaKnown RBP20.28■□□□□ 0.84
Ptpre-201ENSMUST00000073961 Irf9Q61179 399 aa20.28■□□□□ 0.84
Ptpre-201ENSMUST00000073961 Fam50bQ9WTJ8 334 aa20.27■□□□□ 0.84
Ptpre-201ENSMUST00000073961 DmtnQ9WV69 405 aa20.27■□□□□ 0.84
Ptpre-201ENSMUST00000073961 Txndc16Q7TN22 820 aa20.27■□□□□ 0.84
Ptpre-201ENSMUST00000073961 Eif4g1Q6NZJ6 1600 aaKnown RBP20.27■□□□□ 0.84
Ptpre-201ENSMUST00000073961 Znf287Q9EQB9 759 aa20.27■□□□□ 0.84
Ptpre-201ENSMUST00000073961 Grin2aP35436 1464 aa20.27■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Snw1Q9CSN1 536 aaKnown RBP20.27■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Ampd3O08739 766 aa20.26■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Ltv1Q6NSQ7 470 aaKnown RBP20.26■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Lrrfip2Q91WK0 415 aa20.26■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Erlin1Q91X78 346 aa20.26■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Sass6Q80UK7 654 aa20.26■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Mctp2Q5RJH2 878 aa20.26■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Rnf41Q8BH75 317 aa20.26■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Zeb2Q9R0G7 1215 aa20.26■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Gm18336A0A140LIU8 765 aa20.26■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Wdr62Q3U3T8 1523 aa20.26■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Ccne1Q61457 408 aa20.26■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Smc1bQ920F6 1248 aa20.26■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Exoc8Q6PGF7 716 aa20.25■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Il1rapl2Q9ERS6 686 aa20.25■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Cct2P80314 535 aaKnown RBP20.25■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Cep120Q7TSG1 988 aa20.25■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Nap1l2P51860 460 aa20.25■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Cep135Q6P5D4 1140 aa20.25■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Rapgef6Q5NCJ1 1609 aa20.25■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Tshz3Q8CGV9 1081 aa20.25■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Atf7ipQ7TT18 1306 aa20.24■□□□□ 0.83
Ptpre-201ENSMUST00000073961 LifrP42703 1092 aa20.24■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Usp25P57080 1055 aa20.24■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Slc7a3P70423 618 aa20.24■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Znf653Q6YND2 615 aa20.24■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Fbf1A2A870 1173 aa20.24■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Vps37dQ810I0 261 aa20.24■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Mrps27Q8BK72 415 aaKnown RBP20.24■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Klf15Q9EPW2 415 aa20.24■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Ppfia1B2RXQ2 1266 aa20.23■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Chpf2Q3UU43 768 aa20.23■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Stat1P42225 749 aa20.23■□□□□ 0.83
Ptpre-201ENSMUST00000073961 IncenpQ9WU62 880 aa20.23■□□□□ 0.83
Ptpre-201ENSMUST00000073961 OvosQ3UU35 1456 aa20.23■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Traf3ip1Q149C2 625 aa20.23■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Soga3Q6NZL0 945 aa20.23■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Ccdc73Q8CDM4 1066 aa20.23■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Gm10093D3YYI8 482 aa20.22■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Hdac1O09106 482 aaKnown RBP20.22■□□□□ 0.83
Ptpre-201ENSMUST00000073961 EappQ5BU09 281 aa20.22■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Cdca8Q8BHX3 289 aa20.22■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Srgap1Q91Z69 1062 aa20.22■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Gnat3Q3V3I2 354 aa20.22■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Map3k2Q61083 619 aa20.22■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Nkx1-2P42580 305 aa20.21■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Sdc2P43407 202 aa20.21■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Ccdc93Q7TQK5 629 aa20.21■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Gapvd1Q6PAR5 1458 aa20.21■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Bin1O08539 588 aaKnown RBP20.21■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Trim27Q62158 513 aa20.21■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Slc5a1Q8C3K6 665 aa20.21■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Rnf34Q99KR6 376 aa20.21■□□□□ 0.83
Ptpre-201ENSMUST00000073961 CenppQ9CZ92 286 aa20.21■□□□□ 0.83
Ptpre-201ENSMUST00000073961 Atp7aQ64430 1491 aa20.2■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Api5O35841 504 aaKnown RBP20.2■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Cetn2Q9R1K9 172 aa20.2■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Ttc21aQ8C0S4 1314 aa20.2■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Gm10563F6WIE4 79 aa20.2■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Cc2d1bQ8BRN9 848 aa20.2■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Baiap2l1Q9DBJ3 514 aa20.2■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Cfap73J3QPZ5 306 aa20.19■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Echdc1Q9D9V3 322 aa20.19■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Elp1Q7TT37 1333 aaKnown RBP20.19■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Hoxb7P09024 217 aa20.19■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Aplp1Q03157 653 aa20.19■□□□□ 0.82
Ptpre-201ENSMUST00000073961 SfswapQ3USH5 945 aaKnown RBP20.19■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Kcnj4P52189 445 aa20.18■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Cfap157Q0VFX2 523 aa20.18■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Ktn1Q61595 1327 aaKnown RBP20.18■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Mcm10Q0VBD2 885 aa20.18■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Map2k1P31938 393 aa20.18■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Pde1cQ64338 706 aa20.17■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Tbc1d7Q9D0K0 293 aa20.17■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Naa15Q80UM3 865 aaKnown RBP20.17■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Nol11Q8BJW5 723 aaKnown RBP20.17■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Krt23Q99PS0 422 aa20.17■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Brd1E9PZ26 1189 aaKnown RBP20.17■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Ccdc155Q80VJ8 648 aa20.17■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Ano10Q8BH79 659 aa20.17■□□□□ 0.82
Ptpre-201ENSMUST00000073961 Zscan29E9Q5B4 869 aa20.16■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms