RNA–Protein interactions for RNA: ENSMUST00000046207.8

Sf3b6-201, Transcript of Splicing factor 3B subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b6, Length 1,180 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6-201ENSMUST00000046207 Cabp2Q9JLK4 216 aa20.58■□□□□ 0.89
Sf3b6-201ENSMUST00000046207 Ddx60E9PZQ1 1711 aa20.58■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Col4a1P02463 1669 aa20.58■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Prr5lA2AVJ5 370 aa20.57■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 XpcP51612 930 aa20.57■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Myo5bP21271 1818 aa20.57■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Rbm46P86049 533 aa20.56■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Gm12185Q5NCB2 835 aa20.56■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Ppp2r1aQ76MZ3 589 aa20.56■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Spire2Q8K1S6 718 aa20.56■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 NpcdF8VQB8 469 aa20.55■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 CfhP06909 1234 aa20.55■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Snai1Q02085 264 aa20.55■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Usp19Q3UJD6 1360 aa20.55■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Gja3Q64448 417 aa20.54■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Btbd11Q6GQW0 1109 aa20.54■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Unc5clQ6R653 518 aa20.54■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Cd248Q91V98 765 aa20.54■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Rapgef4Q9EQZ6 1011 aa20.54■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Lama4P97927 1816 aa20.54■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Setdb1O88974 1307 aa20.53■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Pdzph1Q8BGR1 1238 aa20.53■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Gigyf1Q99MR1 1044 aaKnown RBP20.53■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 NefmP08553 848 aa20.52■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Arid3aQ62431 601 aa20.52■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Podxl2Q8CAE9 603 aa20.52■□□□□ 0.88
Sf3b6-201ENSMUST00000046207 Iqcf3Q9D498 203 aa20.51■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 U2af1Q9D883 239 aaKnown RBP20.51■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Prr29B1ARI9 187 aa20.5■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Cers3Q1A3B0 383 aa20.5■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Atf5O70191 283 aa20.49■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Esco1Q69Z69 843 aa20.49■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Aebp2Q9Z248 504 aaKnown RBP20.49■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Mrc1Q61830 1456 aa20.49■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Zfp646Q6NV66 1788 aa20.49■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Kif13bA0A286YCV9 1847 aa20.48■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Rtf1A2AQ19 715 aaKnown RBP20.48■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Q4VA45 678 aa20.48■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Ptcd1Q8C2E4 695 aaKnown RBP20.48■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Tcerg1Q8CGF7 1100 aaKnown RBP20.48■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 GsdmaQ9EST1 446 aa20.48■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Flad1Q8R123 492 aa20.47■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Stk32bQ9JJX8 414 aa20.47■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Cnnm1Q0GA42 951 aa20.46■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Iqsec3Q3TES0 1195 aa20.46■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Slf2Q6P9P0 1278 aa20.46■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 SowahdQ8BY98 327 aa20.46■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Nlrp6Q91WS2 869 aa20.46■□□□□ 0.87
Sf3b6-201ENSMUST00000046207 Thrap3Q569Z6 951 aaKnown RBP20.45■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 DaglaQ6WQJ1 1044 aa20.45■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 Rasgrp4Q8BTM9 673 aa20.45■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 Ppp1r3fQ9JIG4 799 aa20.45■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 Mtcl1Q3UHU5 1945 aa20.45■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 Tspoap1Q7TNF8 1846 aa20.44■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 Prkab2Q6PAM0 271 aa20.43■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 TefQ9JLC6 301 aa20.43■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 Olfr247E9PVJ7 320 aa20.42■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 Olfr819K7N727 320 aa20.42■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 St5Q924W7 1134 aa20.42■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 Dusp27Q148W8 1138 aa20.41■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 Dpf2Q61103 391 aaKnown RBP20.41■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 Pdia6Q922R8 440 aaKnown RBP20.41■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 Duox1A2AQ92 1551 aa20.41■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 Zfp831A2ADM8 1628 aa20.4■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 Fhdc1Q3ULZ2 1149 aa20.4■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 Irx6Q9ER75 438 aa20.4■□□□□ 0.86
Sf3b6-201ENSMUST00000046207 Prim1P20664 417 aa20.39■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 NgdnQ9DB96 315 aaKnown RBP20.39■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Ptf1aQ9QX98 324 aa20.39■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Cyp2c23E9Q5K4 494 aa20.38■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Ifit1bl2Q3U687 466 aa20.38■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Soga3Q6NZL0 945 aa20.38■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Slc39a6Q8C145 765 aa20.38■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 CastP51125 788 aa20.37■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Col1a2Q01149 1372 aa20.36■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Scn9aQ62205 1984 aa20.36■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Stox1B2RQL2 990 aa20.36■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Usp34Q6ZQ93 3582 aa20.36■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Znf428Q8C1M2 176 aa20.35■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 PdgfdQ925I7 370 aa20.35■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Thsd7bQ6P4U0 1607 aa20.35■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Ssc5dQ8BV57 1371 aa20.34■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 CltaO08585 235 aa20.34■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Eif4a1P60843 406 aaKnown RBP20.34■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Usp48Q3V0C5 1052 aa20.34■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Ggnbp2Q5SV77 696 aa20.34■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Fbxo33Q8VE08 562 aa20.34■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Npy5rO70342 466 aa20.33■□□□□ 0.85
Sf3b6-201ENSMUST00000046207 Sipa1l3G3X9J0 1776 aa20.32■□□□□ 0.84
Sf3b6-201ENSMUST00000046207 Pde4bB1AWC9 736 aa20.32■□□□□ 0.84
Sf3b6-201ENSMUST00000046207 Slc4a9E9PUP3 929 aa20.32■□□□□ 0.84
Sf3b6-201ENSMUST00000046207 Atp2b4Q6Q477 1205 aa20.32■□□□□ 0.84
Sf3b6-201ENSMUST00000046207 Dbndd1Q9CZ00 160 aa20.32■□□□□ 0.84
Sf3b6-201ENSMUST00000046207 Bcl2l13P59017 434 aa20.31■□□□□ 0.84
Sf3b6-201ENSMUST00000046207 Zc3h15Q3TIV5 426 aaKnown RBP20.31■□□□□ 0.84
Sf3b6-201ENSMUST00000046207 Map3k9Q3U1V8 1077 aa20.31■□□□□ 0.84
Sf3b6-201ENSMUST00000046207 Taf7Q9R1C0 341 aa20.31■□□□□ 0.84
Sf3b6-201ENSMUST00000046207 Trpm7Q923J1 1863 aa20.3■□□□□ 0.84
Sf3b6-201ENSMUST00000046207 Flt1P35969 1333 aa20.3■□□□□ 0.84
Sf3b6-201ENSMUST00000046207 Dctn1O08788 1281 aa20.3■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 10 ms