RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Alpk3Q924C5 1678 aa18.27■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Gm45015A0A140LII9 184 aa18.26■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Gm18336A0A140LIU8 765 aa18.26■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Nid2O88322 1403 aa18.26■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Atp6v1dP57746 247 aa18.26■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 PogkQ80TC5 607 aa18.26■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Aox2Q5SGK3 1345 aa18.26■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Gm9992B2RWK3 458 aa18.26■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Unc93aQ710D3 458 aa18.26■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 PtmaP26350 111 aa18.25■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Wdr17E9Q271 1322 aa18.25■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 St18Q80TY4 1045 aa18.25■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Nol11Q8BJW5 723 aaKnown RBP18.25■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Pdzrn3Q69ZS0 1063 aa18.24■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Mlh1Q9JK91 760 aa18.24■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Smarce1O54941 411 aaKnown RBP18.24■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Ms4a2P20490 235 aa18.24■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Gadd45bP22339 160 aa18.24■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Map3k2Q61083 619 aa18.24■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Cpa2Q504N0 417 aa18.24■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Tgfb1i1Q62219 461 aa18.24■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 KinQ8K339 391 aa18.24■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 4931400O07RikQ9D4M5 137 aa18.24■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Slx4ipQ9D7Y9 413 aa18.23■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Tceal9Q9DD24 104 aa18.23■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Rimbp3Q3V0F0 1606 aa18.23■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 PsapQ61207 557 aaKnown RBP18.23■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Utp18Q5SSI6 552 aaKnown RBP18.22■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 GckrQ91X44 587 aa18.22■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Gtf2a1Q99PM3 378 aa18.22■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Rad50P70388 1312 aa18.22■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Brf1Q8CFK2 676 aa18.22■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Ccdc7Q9D541 371 aa18.21■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Pa2g4P50580 394 aaKnown RBP18.21■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Ccdc155Q80VJ8 648 aa18.2■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Gm10471E9Q1C7 252 aa18.2■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Ints3Q7TPD0 1041 aaKnown RBP18.2■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 BcorQ8CGN4 1759 aa18.19■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Syce3B5KM66 88 aa18.19■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Strn4P58404 760 aa18.19■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 EspnlQ3UYR4 1005 aa18.19■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Atp10bB1AWN4 1474 aa18.19■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Topaz1E5FYH1 1653 aa18.18■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Elmsan1E9Q2I4 1089 aaKnown RBP18.18■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Flt4P35917 1363 aa18.18■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Ddx19aQ61655 478 aaKnown RBP18.18■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Tmem119Q8R138 280 aa18.18■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Brpf1B2RRD7 1212 aa18.18■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Dzip1Q8BMD2 852 aa18.18■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 TnrQ8BYI9 1358 aa18.17■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Gjb2Q00977 226 aa18.17■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Irf9Q61179 399 aa18.17■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 SympkQ80X82 1284 aa18.17■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Thsd7aQ69ZU6 1645 aa18.17■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Abcc4E9Q236 1325 aa18.17■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Fam228bQ497Q6 232 aa18.16■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Nol12Q8BG17 217 aa18.16■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Zbtb3Q91X45 518 aa18.16■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Erich6bQ9D4S6 220 aa18.16■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Eif3aP23116 1344 aaKnown RBP18.16■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Zbtb45Q52KG4 520 aa18.16■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Pof1bQ8K4L4 587 aa18.16■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Top1mtQ8R4U6 593 aa18.16■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Taf5lQ91WQ5 589 aa18.16■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Taf7Q9R1C0 341 aa18.15■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Kif4P33174 1231 aa18.15■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Gripap1Q8VD04 806 aa18.15■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Bicc1Q99MQ1 977 aaKnown RBP18.15■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Col15a1O35206 1367 aa18.15■□□□□ 0.5
Nkx3-1-201ENSMUST00000022646 Ppfia1B2RXQ2 1266 aa18.14■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Edc3Q8K2D3 508 aaKnown RBP18.14■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Glipr1l2Q9CQ35 332 aa18.14■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Pdzd9Q9D9M4 266 aa18.14■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Siglec1Q62230 1695 aa18.14■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Gli3Q61602 1583 aa18.14■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Grm8P47743 908 aa18.14■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Rufy3Q9D394 469 aa18.14■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Simc1E9Q6E9 1354 aa18.13■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 HellsQ60848 821 aa18.13■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Rrp12Q6P5B0 1295 aaKnown RBP18.12■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Add2Q9QYB8 725 aa18.12■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Lmbr1lQ9D1E5 489 aa18.12■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Rbm27Q5SFM8 1060 aaKnown RBP18.12■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Ifit2Q64112 472 aa18.12■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Ddrgk1Q80WW9 315 aa18.12■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Rnf214Q8BFU3 668 aaKnown RBP18.12■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Slain2Q8CI08 581 aa18.12■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 TkfcQ8VC30 578 aa18.12■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Ets1P27577 440 aa18.11■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Igfbp6P47880 238 aa18.11■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 GnpatP98192 678 aa18.11■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 VgfQ0VGU4 617 aa18.11■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Pdia6Q922R8 440 aaKnown RBP18.11■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 ThemisQ8BGW0 636 aa18.11■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Rrp9Q91WM3 475 aaKnown RBP18.11■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Unc13bQ9Z1N9 1602 aa18.1■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 F2rP30558 430 aa18.1■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 OptnQ8K3K8 584 aa18.1■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Chmp7Q8R1T1 451 aa18.1■□□□□ 0.49
Nkx3-1-201ENSMUST00000022646 Dhx16G3X8X0 1044 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms