RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 Erbb4Q61527 1308 aa20.64■□□□□ 0.89
Ubb-201ENSMUST00000019649 Bcl2l13P59017 434 aa20.63■□□□□ 0.89
Ubb-201ENSMUST00000019649 Tmem119Q8R138 280 aa20.63■□□□□ 0.89
Ubb-201ENSMUST00000019649 Nsfl1cQ9CZ44 370 aaKnown RBP20.63■□□□□ 0.89
Ubb-201ENSMUST00000019649 Cdc37l1Q9CZP7 335 aa20.63■□□□□ 0.89
Ubb-201ENSMUST00000019649 Sipa1l3G3X9J0 1776 aa20.63■□□□□ 0.89
Ubb-201ENSMUST00000019649 BcorQ8CGN4 1759 aa20.63■□□□□ 0.89
Ubb-201ENSMUST00000019649 Fkbp4P30416 458 aa20.62■□□□□ 0.89
Ubb-201ENSMUST00000019649 Rbm26Q6NZN0 1012 aaKnown RBP20.62■□□□□ 0.89
Ubb-201ENSMUST00000019649 Anks4bQ8K3X6 423 aa20.62■□□□□ 0.89
Ubb-201ENSMUST00000019649 Ubn2Q80WC1 1314 aa20.62■□□□□ 0.89
Ubb-201ENSMUST00000019649 1700019A02RikA0A087WPV9 146 aa20.62■□□□□ 0.89
Ubb-201ENSMUST00000019649 Atf5O70191 283 aa20.62■□□□□ 0.89
Ubb-201ENSMUST00000019649 Slc39a6Q8C145 765 aa20.62■□□□□ 0.89
Ubb-201ENSMUST00000019649 Usp21Q9QZL6 566 aa20.62■□□□□ 0.89
Ubb-201ENSMUST00000019649 Usp16Q99LG0 825 aa20.61■□□□□ 0.89
Ubb-201ENSMUST00000019649 Mrps5Q99N87 432 aaKnown RBP20.61■□□□□ 0.89
Ubb-201ENSMUST00000019649 Speer4f1Q9D5Q6 258 aa20.61■□□□□ 0.89
Ubb-201ENSMUST00000019649 Strn4P58404 760 aa20.6■□□□□ 0.89
Ubb-201ENSMUST00000019649 Q3TQI7 289 aaKnown RBP20.6■□□□□ 0.89
Ubb-201ENSMUST00000019649 PsapQ61207 557 aaKnown RBP20.6■□□□□ 0.89
Ubb-201ENSMUST00000019649 Ralbp1Q62172 648 aa20.6■□□□□ 0.89
Ubb-201ENSMUST00000019649 Ankrd50F7BE84 1390 aa20.59■□□□□ 0.89
Ubb-201ENSMUST00000019649 SympkQ80X82 1284 aa20.59■□□□□ 0.89
Ubb-201ENSMUST00000019649 Wdhd1P59328 1117 aa20.58■□□□□ 0.89
Ubb-201ENSMUST00000019649 Esco1Q69Z69 843 aa20.58■□□□□ 0.89
Ubb-201ENSMUST00000019649 Morc2aQ69ZX6 1030 aa20.58■□□□□ 0.89
Ubb-201ENSMUST00000019649 Trim52Q8CDV4 233 aa20.58■□□□□ 0.89
Ubb-201ENSMUST00000019649 Ttc21aQ8C0S4 1314 aa20.58■□□□□ 0.88
Ubb-201ENSMUST00000019649 Neurod2Q62414 383 aa20.57■□□□□ 0.88
Ubb-201ENSMUST00000019649 Plekhh1Q80TI1 1356 aa20.57■□□□□ 0.88
Ubb-201ENSMUST00000019649 Snai1Q02085 264 aa20.56■□□□□ 0.88
Ubb-201ENSMUST00000019649 Tktl2Q9D4D4 627 aa20.56■□□□□ 0.88
Ubb-201ENSMUST00000019649 Tgfb2P27090 414 aa20.56■□□□□ 0.88
Ubb-201ENSMUST00000019649 Slf2Q6P9P0 1278 aa20.56■□□□□ 0.88
Ubb-201ENSMUST00000019649 Cfap70D3YVL2 1141 aa20.55■□□□□ 0.88
Ubb-201ENSMUST00000019649 Rbm25B2RY56 838 aaKnown RBP20.54■□□□□ 0.88
Ubb-201ENSMUST00000019649 SowahdQ8BY98 327 aa20.54■□□□□ 0.88
Ubb-201ENSMUST00000019649 Znf710Q3U288 666 aa20.52■□□□□ 0.88
Ubb-201ENSMUST00000019649 Ambra1A2AH22 1300 aa20.52■□□□□ 0.88
Ubb-201ENSMUST00000019649 Ssc5dQ8BV57 1371 aa20.52■□□□□ 0.88
Ubb-201ENSMUST00000019649 Frmpd3A0A140LIW3 1774 aa20.51■□□□□ 0.87
Ubb-201ENSMUST00000019649 Igfbp6P47880 238 aa20.51■□□□□ 0.87
Ubb-201ENSMUST00000019649 Itgb4A2A863 1818 aa20.51■□□□□ 0.87
Ubb-201ENSMUST00000019649 Prdm11A2AGX3 565 aa20.5■□□□□ 0.87
Ubb-201ENSMUST00000019649 Gnl3lQ6PGG6 577 aaKnown RBP20.5■□□□□ 0.87
Ubb-201ENSMUST00000019649 Sgip1Q8VD37 806 aa20.5■□□□□ 0.87
Ubb-201ENSMUST00000019649 Slurp2P0DP59 97 aa20.5■□□□□ 0.87
Ubb-201ENSMUST00000019649 Rad21Q61550 635 aaKnown RBP20.5■□□□□ 0.87
Ubb-201ENSMUST00000019649 Camkk2Q8C078 588 aa20.5■□□□□ 0.87
Ubb-201ENSMUST00000019649 Nlrp3Q8R4B8 1033 aa20.5■□□□□ 0.87
Ubb-201ENSMUST00000019649 Ttll7A4Q9F0 912 aa20.49■□□□□ 0.87
Ubb-201ENSMUST00000019649 NudcO35685 332 aaKnown RBP20.49■□□□□ 0.87
Ubb-201ENSMUST00000019649 Cyp2c67Q569X9 491 aa20.49■□□□□ 0.87
Ubb-201ENSMUST00000019649 NgdnQ9DB96 315 aaKnown RBP20.49■□□□□ 0.87
Ubb-201ENSMUST00000019649 Cnksr1A2A9K7 700 aa20.48■□□□□ 0.87
Ubb-201ENSMUST00000019649 Ifit1bl2Q3U687 466 aa20.48■□□□□ 0.87
Ubb-201ENSMUST00000019649 Ankle2Q6P1H6 964 aa20.48■□□□□ 0.87
Ubb-201ENSMUST00000019649 Taf1dQ9D4V4 322 aa20.48■□□□□ 0.87
Ubb-201ENSMUST00000019649 Duox1A2AQ92 1551 aa20.47■□□□□ 0.87
Ubb-201ENSMUST00000019649 Ccdc30Q8BVF4 654 aa20.47■□□□□ 0.87
Ubb-201ENSMUST00000019649 Kcnn1Q9EQR3 537 aa20.47■□□□□ 0.87
Ubb-201ENSMUST00000019649 Kif13bA0A286YCV9 1847 aa20.47■□□□□ 0.87
Ubb-201ENSMUST00000019649 Casz1Q9CWL2 1761 aa20.47■□□□□ 0.87
Ubb-201ENSMUST00000019649 Col4a5Q63ZW6 1691 aa20.46■□□□□ 0.87
Ubb-201ENSMUST00000019649 Rnf180Q3U827 592 aa20.46■□□□□ 0.87
Ubb-201ENSMUST00000019649 Arid3aQ62431 601 aa20.46■□□□□ 0.87
Ubb-201ENSMUST00000019649 Tango6Q8C3S2 1079 aa20.46■□□□□ 0.87
Ubb-201ENSMUST00000019649 Rnaseh2aQ9CWY8 301 aa20.45■□□□□ 0.86
Ubb-201ENSMUST00000019649 Ksr2Q3UVC0 959 aa20.44■□□□□ 0.86
Ubb-201ENSMUST00000019649 IarsQ8BU30 1262 aa20.44■□□□□ 0.86
Ubb-201ENSMUST00000019649 Cyp2c23E9Q5K4 494 aa20.43■□□□□ 0.86
Ubb-201ENSMUST00000019649 Npy5rO70342 466 aa20.43■□□□□ 0.86
Ubb-201ENSMUST00000019649 Fkbp1aP26883 108 aaKnown RBP20.43■□□□□ 0.86
Ubb-201ENSMUST00000019649 CoilQ5SU73 570 aa20.43■□□□□ 0.86
Ubb-201ENSMUST00000019649 Trim34aQ99PP6 485 aa20.43■□□□□ 0.86
Ubb-201ENSMUST00000019649 Ankrd31A0A140LI88 1765 aa20.42■□□□□ 0.86
Ubb-201ENSMUST00000019649 Mrc1Q61830 1456 aa20.42■□□□□ 0.86
Ubb-201ENSMUST00000019649 Rtkn2Q14B46 604 aa20.42■□□□□ 0.86
Ubb-201ENSMUST00000019649 Adam1aQ60813 791 aa20.42■□□□□ 0.86
Ubb-201ENSMUST00000019649 Mapk8ip1Q9WVI9 707 aa20.42■□□□□ 0.86
Ubb-201ENSMUST00000019649 Kank1E9Q238 1360 aa20.42■□□□□ 0.86
Ubb-201ENSMUST00000019649 Stox1B2RQL2 990 aa20.41■□□□□ 0.86
Ubb-201ENSMUST00000019649 Vamp4O70480 141 aa20.41■□□□□ 0.86
Ubb-201ENSMUST00000019649 Lmnb1P14733 588 aaKnown RBP20.41■□□□□ 0.86
Ubb-201ENSMUST00000019649 Gas2l2Q5SSG4 860 aa20.41■□□□□ 0.86
Ubb-201ENSMUST00000019649 Zcwpw1Q6IR42 630 aa20.41■□□□□ 0.86
Ubb-201ENSMUST00000019649 Zbtb40Q6PCS8 1258 aa20.41■□□□□ 0.86
Ubb-201ENSMUST00000019649 Flt4P35917 1363 aa20.41■□□□□ 0.86
Ubb-201ENSMUST00000019649 Arap2Q8BZ05 1703 aa20.41■□□□□ 0.86
Ubb-201ENSMUST00000019649 Pde4bB1AWC9 736 aa20.4■□□□□ 0.86
Ubb-201ENSMUST00000019649 Cyp2c69E9PXC3 491 aa20.4■□□□□ 0.86
Ubb-201ENSMUST00000019649 Cyp2c40P56657 491 aa20.4■□□□□ 0.86
Ubb-201ENSMUST00000019649 Zc3h12cQ5DTV4 884 aa20.4■□□□□ 0.86
Ubb-201ENSMUST00000019649 Gimap8Q75N62 688 aa20.4■□□□□ 0.86
Ubb-201ENSMUST00000019649 Tnnt3Q9QZ47 272 aa20.4■□□□□ 0.86
Ubb-201ENSMUST00000019649 CltaO08585 235 aa20.39■□□□□ 0.85
Ubb-201ENSMUST00000019649 Hspa2P17156 633 aa20.39■□□□□ 0.85
Ubb-201ENSMUST00000019649 SnrkQ8VDU5 748 aa20.39■□□□□ 0.85
Ubb-201ENSMUST00000019649 Ank1Q02357 1862 aa20.38■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms