RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	MRPL28	Q13084	256 aa	Known RBP	11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	VEPH1	Q14D04	833 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	LARS2	Q15031	903 aa	Known RBP	11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	SF3A2	Q15428	464 aa	Known RBP	11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	SPHAR	Q15513	63 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	FRG2	Q64ET8	278 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	NOXRED1	Q6NXP6	359 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	SUSD1	Q6UWL2	747 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	PTOV1	Q86YD1	416 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	ELMOD2	Q8IZ81	293 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	GHDC	Q8N2G8	530 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	C19orf18	Q8NEA5	215 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	GPR152	Q8TDT2	470 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	KCTD12	Q96CX2	325 aa	Known RBP	11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	COQ8B	Q96D53	544 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	RPL10L	Q96L21	214 aa	Known RBP	11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	FRG2B	Q96QU4	278 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	MCCC1	Q96RQ3	725 aa	Predicted RBP	11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	FEV	Q99581	238 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	CHCHD6	Q9BRQ6	235 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	MARVELD1	Q9BSK0	173 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	ACPT	Q9BZG2	426 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	IRF2BPL	Q9H1B7	796 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	CRISPLD1	Q9H336	500 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	PIGU	Q9H490	435 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	TPT1P8	Q9HAU6	139 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	RASSF1	Q9NS23	344 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	TAS2R7	Q9NYW3	318 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	IL20	Q9NYY1	176 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	PPT2	Q9UMR5	302 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	ING4	Q9UNL4	249 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	GINS2	Q9Y248	185 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	RAI2	Q9Y5P3	530 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	BRCA1	P38398	1863 aa	Known RBP	11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	DSPP	Q9NZW4	1301 aa		11.33	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	KCNE1B	A0A087WTH5	132 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	TMEM129	A0AVI4	362 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	FABP12	A6NFH5	140 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236		B4DXG7	233 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236		H0YIV9	168 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	PITPNM1	O00562	1244 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	TFEC	O14948	347 aa	Predicted RBP	11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	NDUFB5	O43674	189 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	FZD6	O60353	706 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	B3GAT3	O94766	335 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	MOCS2	O96007	188 aa	Predicted RBP	11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	STS	P08842	583 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	ZDHHC11B	P0C7U3	371 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	SPN	P16150	400 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	ZNF30	P17039	623 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	CD53	P19397	219 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	CBL	P22681	906 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	C21orf33	P30042	268 aa	Predicted RBP	11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	MAP2K3	P46734	347 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	SLC6A12	P48065	614 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	RFX2	P48378	723 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	KCNQ1	P51787	676 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	CRISP1	P54107	249 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	IL1RL1	Q01638	556 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	HYAL2	Q12891	473 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	DMC1	Q14565	340 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	GPR19	Q15760	415 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	COL28A1	Q2UY09	1125 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	KLHL12	Q53G59	568 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	C3orf38	Q5JPI3	329 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	HABP4	Q5JVS0	413 aa	Known RBP	11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	PLEKHS1	Q5SXH7	462 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	SCIMP	Q6UWF3	145 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	RNF19B	Q6ZMZ0	732 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	SPATC1	Q76KD6	591 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	ZNF598	Q86UK7	904 aa	Known RBP	11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	FAM124A	Q86V42	546 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	GJD3	Q8N144	294 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	CELF2-AS1	Q8N7Q2	184 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	GALNT11	Q8NCW6	608 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	TRPV1	Q8NER1	839 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	B3GNT7	Q8NFL0	401 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	OR52N2	Q8NGI0	321 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	GPR151	Q8TDV0	419 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	CREB3L4	Q8TEY5	395 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	KCTD7	Q96MP8	289 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	LYSMD1	Q96S90	227 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	C7orf50	Q9BRJ6	194 aa	Known RBP	11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	CENPO	Q9BU64	300 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	OR51E2	Q9H255	320 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	NSUN3	Q9H649	340 aa	Known RBP	11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	ADARB2	Q9NS39	739 aa	Known RBP	11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	RAD18	Q9NS91	495 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	GPRC5B	Q9NZH0	403 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	NDUFAF4	Q9P032	175 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	GULP1	Q9UBP9	304 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	GLS2	Q9UI32	602 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	KCND3	Q9UK17	655 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	DIMT1	Q9UNQ2	313 aa	Known RBP	11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	POLH	Q9Y253	713 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	ANGPT4	Q9Y264	503 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	KLHL20	Q9Y2M5	609 aa		11.32	□□□□□ -0.6
U2AF1L4-221	ENST00000601236	SPO11	Q9Y5K1	396 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms