RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 CD320Q9NPF0 282 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 AASDHPPTQ9NRN7 309 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 HEMK1Q9Y5R4 338 aaPredicted RBP14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 IGLON5A6NGN9 336 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 LINC01565O15544 149 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 ABCB1P08183 1280 aaPredicted RBP14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 TFPTP0C1Z6 253 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 IL7RP16871 459 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 IDSP22304 550 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 TIA1P31483 386 aaKnown RBP eCLIP14.6□□□□□ -0.071e-6■■■■□ 21.9
SCAMP4-202ENST00000409472 POLR2IP36954 125 aaKnown RBP14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 DCTP40126 519 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 EIF4HQ15056 248 aaKnown RBP14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 PRSS53Q2L4Q9 553 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 TMEM52BQ4KMG9 183 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 ABRAXAS1Q6UWZ7 409 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 ZNF765Q7L2R6 523 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 IQCF2Q8IXL9 164 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 OR52E4Q8NGH9 312 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 PLEKHA8Q96JA3 519 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 MAGEB10Q96LZ2 347 aaPredicted RBP14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 KXD1Q9BQD3 176 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 OSBPL10Q9BXB5 764 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 ZCCHC2Q9C0B9 1178 aaKnown RBP14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 OR52A5Q9H2C5 316 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 SFXN1Q9H9B4 322 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 DYRK4Q9NR20 520 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 EXD2Q9NVH0 621 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 ATAD3AQ9NVI7 634 aa14.6□□□□□ -0.07
SCAMP4-202ENST00000409472 hCG_2039718K7EN88 272 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 GNGT2O14610 69 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 MID1O15344 667 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 EPN2O95208 641 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 FUCA1P04066 466 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 NTRK1P04629 796 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 AQP1P29972 269 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 SOX9P48436 509 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 TUBA4AP68366 448 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 SRSF11Q05519 484 aaKnown RBP14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 PCDH1Q08174 1060 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 C16orf87Q6PH81 154 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 COMMD6Q7Z4G1 85 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 VN1R5Q7Z5H4 357 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 FAM9CQ8IZT9 166 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 OR2L2Q8NH16 312 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 DNAJB8Q8NHS0 232 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 CXorf40AQ8TE69 158 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 CIDECQ96AQ7 238 aaPredicted RBP14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 PYURFQ96I23 114 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 PPP1R16AQ96I34 528 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 NDEL1Q9GZM8 345 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 DMRT3Q9NQL9 472 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 C8orf4Q9NR00 106 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 ASF1AQ9Y294 204 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 C1orf226A1L170 272 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 TRIM64CA6NLI5 447 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 TMX2-CTNND1H3BSU7 103 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 RFXAPO00287 272 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 MITFO75030 526 aaPredicted RBP14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 BMP10O95393 424 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 RPS3AP61247 264 aaKnown RBP14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 ESRRGP62508 458 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 VLDLRP98155 873 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 GTF2H3Q13889 308 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 VMACQ2NL98 169 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 ANKDD1AQ495B1 522 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 C2orf27AQ580R0 203 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 MSANTD1Q6ZTZ1 278 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 CEP68Q76N32 757 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 SERPINA11Q86U17 422 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 ZCCHC7Q8N3Z6 543 aaKnown RBP14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 FBXO15Q8NCQ5 510 aaPredicted RBP14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 RPP25Q9BUL9 199 aaKnown RBP14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 PBX4Q9BYU1 374 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 TPT1P8Q9HAU6 139 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 MBNL1Q9NR56 388 aaKnown RBP14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 FAM120CQ9NX05 1096 aaKnown RBP14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 DPP7Q9UHL4 492 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 ACSL6Q9UKU0 697 aa14.59□□□□□ -0.07
SCAMP4-202ENST00000409472 LATO43561 262 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 PRMT3O60678 531 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 KAT7O95251 611 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 HSD3B1P14060 373 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 GPX2P18283 190 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 HSD3B2P26439 372 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 PSMB5P28074 263 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 TRPC1P48995 793 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 PNLIPRP1P54315 467 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 ERVK-21P61565 698 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 KCNC4Q03721 635 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 MPEG1Q2M385 716 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 DPY19L1Q2PZI1 675 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 CPTPQ5TA50 214 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 SLC5A11Q8WWX8 675 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 KLK6Q92876 244 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 THAP11Q96EK4 314 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 LINC00615Q96LM1 132 aaPredicted RBP14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 CHST8Q9H2A9 424 aa14.58□□□□□ -0.08
SCAMP4-202ENST00000409472 SH3BP4Q9P0V3 963 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms