RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 ZNF808Q8N4W9 903 aaPredicted RBP15.93■□□□□ 0.14
PTCH1-201ENST00000331920 TMEM134Q9H6X4 195 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 ZNF395Q9H8N7 513 aaPredicted RBP15.93■□□□□ 0.14
PTCH1-201ENST00000331920 NEO1Q92859 1461 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 ZIC2O95409 532 aaPredicted RBP15.93■□□□□ 0.14
PTCH1-201ENST00000331920 HTR2AP28223 471 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 NOMO3P69849 1222 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 RHDQ02161 417 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 NOMO1Q15155 1222 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 ATPAF1Q5TC12 328 aaPredicted RBP15.93■□□□□ 0.14
PTCH1-201ENST00000331920 UBE2J1Q9Y385 318 aaPredicted RBP15.93■□□□□ 0.14
PTCH1-201ENST00000331920 ARPC4-TTLL3A0A0A6YYG9 625 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 GMDSO60547 372 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 MSCO60682 206 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 APOC3P02656 99 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 MATN1P21941 496 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 GRPRP30550 384 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 CASP6P55212 293 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 CAP1Q01518 475 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 SLBPQ14493 270 aaKnown RBP eCLIP15.93■□□□□ 0.14
PTCH1-201ENST00000331920 GLIS3Q8NEA6 775 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 NLGN4YQ8NFZ3 816 aaPredicted RBP15.93■□□□□ 0.14
PTCH1-201ENST00000331920 ZDHHC1Q8WTX9 485 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 OR14A2Q96R54 314 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 OR51I1Q9H343 314 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 TIGARQ9NQ88 270 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 H1F0P07305 194 aaKnown RBP15.93■□□□□ 0.14
PTCH1-201ENST00000331920 CDKN2CP42773 168 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 KDELC1Q6UW63 502 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 CLEC17AQ6ZS10 378 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 SPOCK2Q92563 424 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 SLC30A2Q9BRI3 323 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 KATNBL1Q9H079 304 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 TDP1Q9NUW8 608 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 COPZ2Q9P299 210 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 MGAT4CQ9UBM8 478 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 LOC100130705A0A1B0GUX0 176 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 B4GALT5O43286 388 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 ID2Q02363 134 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 HNRNPA0Q13151 305 aaKnown RBP15.93■□□□□ 0.14
PTCH1-201ENST00000331920 PON3Q15166 354 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 CEACAM20Q6UY09 585 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 TCEAL4Q96EI5 215 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 ERVK-7P63135 1459 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 AKR1C2P52895 323 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 PPP2R2DQ66LE6 453 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 ITPAQ9BY32 194 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 MRPS17Q9Y2R5 130 aaKnown RBP15.93■□□□□ 0.14
PTCH1-201ENST00000331920 BOLA2-SMG1P6H3BVE0 249 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 H6PDO95479 791 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 POP4O95707 220 aaKnown RBP15.93■□□□□ 0.14
PTCH1-201ENST00000331920 JMJD7P0C870 316 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 RRAS2P62070 204 aaPredicted RBP15.93■□□□□ 0.14
PTCH1-201ENST00000331920 FAM86B1Q8N7N1 296 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 ASB6Q9NWX5 421 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 RHCGQ9UBD6 479 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 PCDHGA11Q9Y5H2 935 aa15.93■□□□□ 0.14
PTCH1-201ENST00000331920 DUXAA6NLW8 204 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 RUNX2Q13950 521 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 PPA1Q15181 289 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 PYROXD2Q8N2H3 581 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 ASB15Q8WXK1 588 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 LRRC19Q9H756 370 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 TTC24A2A3L6 582 aaPredicted RBP15.92■□□□□ 0.14
PTCH1-201ENST00000331920 ACTR1BP42025 376 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 NR4A2P43354 598 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 ALDH3B2P48448 385 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 TLE1Q04724 770 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 LMX1AQ8TE12 382 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 GEMIN6Q8WXD5 167 aaKnown RBP15.92■□□□□ 0.14
PTCH1-201ENST00000331920 GCDHQ92947 438 aaPredicted RBP15.92■□□□□ 0.14
PTCH1-201ENST00000331920 PELOQ9BRX2 385 aaKnown RBP15.92■□□□□ 0.14
PTCH1-201ENST00000331920 NDUFAF4Q9P032 175 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 C12orf71A8MTZ7 269 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 HMGN1P05114 100 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 TACR2P21452 398 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 VGLL4Q14135 290 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 INAVAQ3KP66 663 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 DPY19L3Q6ZPD9 716 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 GPR149Q86SP6 731 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 UBXN10Q96LJ8 280 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 NEDD4LQ96PU5 975 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 COQ3Q9NZJ6 369 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 RUVBL1Q9Y265 456 aaKnown RBP15.92■□□□□ 0.14
PTCH1-201ENST00000331920 RNF215Q9Y6U7 377 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 EEF1E1O43324 174 aaKnown RBP15.92■□□□□ 0.14
PTCH1-201ENST00000331920 ADH6P28332 368 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 FBXO22Q8NEZ5 403 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 SPRYD4Q8WW59 207 aaPredicted RBP15.92■□□□□ 0.14
PTCH1-201ENST00000331920 CNTN3Q9P232 1028 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 K7EPK0 472 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 CAPN3P20807 821 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 CCDC28AQ8IWP9 274 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 FAM71E2Q8N5Q1 922 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 ARL14EPQ8N8R7 260 aaPredicted RBP15.92■□□□□ 0.14
PTCH1-201ENST00000331920 SLC13A3Q8WWT9 602 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 UNC93B1Q9H1C4 597 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 ZNF442Q9H7R0 627 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 FLRT1Q9NZU1 646 aa15.92■□□□□ 0.14
PTCH1-201ENST00000331920 RBM47A0AV96 593 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms