RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 ACTL6BO94805 426 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 IFNGR1P15260 489 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 CHMP24386 653 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 CRHR1P34998 444 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 LUMP51884 338 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 CDONQ4KMG0 1287 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 ELF4Q99607 663 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 ATG5Q9H1Y0 275 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 C11orf49Q9H6J7 331 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 WDR26Q9H7D7 661 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 TUBG2Q9NRH3 451 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 MAGEL2Q9UJ55 1249 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 PLLPQ9Y342 182 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 C5orf60A6NFR6 353 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 EDNRBP24530 442 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 CTBP2P56545 445 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 STOML3Q8TAV4 291 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 SPRYD4Q8WW59 207 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 LPGAT1Q92604 370 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 TIFAQ96CG3 184 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 ICKQ9UPZ9 632 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 SOWAHBA6NEL2 793 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 ENSAO43768 121 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 RAD1O60671 282 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 CRB2Q5IJ48 1285 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 C9orf135Q5VTT2 229 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 FKBP1CQ5VVH2 108 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 CTU1Q7Z7A3 348 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 TMEM17Q86X19 198 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 COL1A2P08123 1366 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 ZNF423Q2M1K9 1284 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 LRRC46Q96FV0 321 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 COL21A1Q96P44 957 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 TMEM185BQ9H7F4 350 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 PNPLA3Q9NST1 481 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 POT1Q9NUX5 634 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 ZNF850A8MQ14 1090 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 HHLA1C9JL84 531 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 CASC3O15234 703 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 IFNA2P01563 188 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 RHOQP17081 205 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 LSSP48449 732 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 SLBPQ14493 270 aaKnown RBP eCLIP16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 STRADAQ7RTN6 431 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 OR9K2Q8NGE7 335 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 OR13C3Q8NGS6 347 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 C17orf50Q8WW18 174 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 CMKLR1Q99788 373 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 HCRTO43612 131 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 GSTT2BP0CG30 244 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 SQSTM1Q13501 440 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 OLIG2Q13516 323 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 FAM174BQ3ZCQ3 159 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 C9orf152Q5JTZ5 239 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 FAM180BQ6P0A1 224 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 FARSBQ9NSD9 589 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 NUDT15Q9NV35 164 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 CDH22Q9UJ99 828 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 DERAQ9Y315 318 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 RPS2P15880 293 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 MPIP34949 423 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 RNF4P78317 190 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 FPGSQ05932 587 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 KLF10Q13118 480 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 ARL13AQ5H913 290 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 C3orf38Q5JPI3 329 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 VSTM1Q6UX27 236 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 MON1BQ7L1V2 547 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 MARCH9Q86YJ5 346 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 PCTPQ9UKL6 214 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 RAB21Q9UL25 225 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 FADS3Q9Y5Q0 445 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 CD79AP11912 226 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 PRKCIP41743 596 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 FAM110CQ1W6H9 321 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 LRRC38Q5VT99 294 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 PSKH2Q96QS6 385 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 ZNF446Q9NWS9 450 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 ZNF136P52737 540 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 SUN5Q8TC36 379 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 TFAP2BQ92481 460 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 NXF5Q9H1B4 397 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 XKR8Q9H6D3 395 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 ABCG2Q9UNQ0 655 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 B8ZZF3 427 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 NRP1O14786 923 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 WDPCPO95876 746 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 F10P00742 488 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 FOSL1P15407 271 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 PTAFRP25105 342 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 GDF10P55107 478 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 LILRA4P59901 499 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 RPA4Q13156 261 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 WDR20Q8TBZ3 569 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 FAM83CQ9BQN1 747 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 BCO2Q9BYV7 579 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 GCM1Q9NP62 436 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 MGAT4BQ9UQ53 548 aa16.5■□□□□ 0.23
CACNA1A-253ENST00000637927 LATS1O95835 1130 aa16.49■□□□□ 0.23
CACNA1A-253ENST00000637927 LCLAT1Q6UWP7 414 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms