RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 SPAM1P38567 509 aa10.12□□□□□ -0.79
LIG1-220ENST00000601091 ADH7P40394 386 aa10.12□□□□□ -0.79
LIG1-220ENST00000601091 GSTM5P46439 218 aa10.12□□□□□ -0.79
LIG1-220ENST00000601091 ALDH3A2P51648 485 aa10.12□□□□□ -0.79
LIG1-220ENST00000601091 HABP2Q14520 560 aaPredicted RBP10.12□□□□□ -0.79
LIG1-220ENST00000601091 KRT33BQ14525 404 aa10.12□□□□□ -0.79
LIG1-220ENST00000601091 LEXMQ3ZCV2 418 aa10.12□□□□□ -0.79
LIG1-220ENST00000601091 ATXN7L2Q5T6C5 722 aaPredicted RBP10.12□□□□□ -0.79
LIG1-220ENST00000601091 CMTR2Q8IYT2 770 aaKnown RBP10.12□□□□□ -0.79
LIG1-220ENST00000601091 TMEM102Q8N9M5 508 aaPredicted RBP10.12□□□□□ -0.79
LIG1-220ENST00000601091 ELMO1Q92556 727 aa10.12□□□□□ -0.79
LIG1-220ENST00000601091 ISOC1Q96CN7 298 aa10.12□□□□□ -0.79
LIG1-220ENST00000601091 MYRFLQ96LU7 910 aa10.12□□□□□ -0.79
LIG1-220ENST00000601091 GPR78Q96P69 363 aa10.12□□□□□ -0.79
LIG1-220ENST00000601091 NAA50Q9GZZ1 169 aaKnown RBP10.12□□□□□ -0.79
LIG1-220ENST00000601091 RANBP3Q9H6Z4 567 aaPredicted RBP10.12□□□□□ -0.79
LIG1-220ENST00000601091 ZNF224Q9NZL3 707 aa10.12□□□□□ -0.79
LIG1-220ENST00000601091 ERGIC3Q9Y282 383 aa10.12□□□□□ -0.79
LIG1-220ENST00000601091 PMF1-BGLAPU3KQ54 211 aa10.12□□□□□ -0.79
LIG1-220ENST00000601091 PCM1Q15154 2024 aa10.12□□□□□ -0.79
LIG1-220ENST00000601091 MYADML2A6NDP7 307 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 PPP6CO00743 305 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 ANGPTL1O95841 491 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 PRPS2P11908 318 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 POU1F1P28069 291 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 ARSFP54793 590 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 RPS14P62263 151 aaKnown RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 CDC20Q12834 499 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 ZNF846Q147U1 533 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 ATP6AP1Q15904 470 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 MORN1Q5T089 497 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 KANK2Q63ZY3 851 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 PRSS55Q6UWB4 352 aaPredicted RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 ZNF227Q86WZ6 799 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 LHFPL5Q8TAF8 219 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 ZNF420Q8TAQ5 688 aaPredicted RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 FBXW5Q969U6 566 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 MSANTD3Q96H12 275 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 VRK1Q99986 396 aaPredicted RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 RIMS4Q9H426 269 aaPredicted RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 LIN7BQ9HAP6 207 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 CCNB1IP1Q9NPC3 277 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 DYRK4Q9NR20 520 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 CMTM6Q9NX76 183 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 DYRK1BQ9Y463 629 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 MTMR11A4FU01 709 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 OR1I1O60431 355 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 CYP4B1P13584 511 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 PCSK2P16519 638 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 FOXA1P55317 472 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 NFKB2Q00653 900 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 RBM48Q5RL73 367 aaKnown RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 PRPF38BQ5VTL8 546 aaKnown RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 GALNT18Q6P9A2 607 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 MEX3BQ6ZN04 569 aaKnown RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 CCDC149Q6ZUS6 474 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 RRM2BQ7LG56 351 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 TIPARPQ7Z3E1 657 aaKnown RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 ANKRD46Q86W74 232 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 RASAL3Q86YV0 1011 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 DBF4BQ8NFT6 615 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 GPR150Q8NGU9 434 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 OR6S1Q8NH40 331 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 S100ZQ8WXG8 99 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 MAGEB10Q96LZ2 347 aaPredicted RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 ACPTQ9BZG2 426 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 TRIT1Q9H3H1 467 aaKnown RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 NSUN3Q9H649 340 aaKnown RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 ZDHHC6Q9H6R6 413 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 HMX1Q9NP08 348 aaPredicted RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 KRT84Q9NSB2 600 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 FLRT1Q9NZU1 646 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 TMEM9Q9P0T7 183 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 SLC22A14Q9Y267 594 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 DOCK5Q9H7D0 1870 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 LOC285095A0A1B0GVY8 99 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 PQBP1O60828 265 aaKnown RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 ERN1O75460 977 aaKnown RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 PRKD3O94806 890 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 DLGAP3O95886 979 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 ZNF182P17025 639 aaPredicted RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 ZNF26P17031 533 aaPredicted RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 IGFBP6P24592 240 aaPredicted RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 ARNTP27540 789 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 RRM2P31350 389 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 DPP6P42658 865 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 ERVFC1P60507 584 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 GMFBP60983 142 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 PSRC1Q6PGN9 363 aaPredicted RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 LYSMD3Q7Z3D4 306 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 GOLGA7Q7Z5G4 137 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 SNX20Q7Z614 316 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 SRFBP1Q8NEF9 429 aaKnown RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 FUBP1Q96AE4 644 aaKnown RBP10.11□□□□□ -0.79
LIG1-220ENST00000601091 TMEM246Q9BRR3 403 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 ROGDIQ9GZN7 287 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 UGT2A1Q9Y4X1 527 aa10.11□□□□□ -0.79
LIG1-220ENST00000601091 GSAPA4D1B5 854 aa10.1□□□□□ -0.79
LIG1-220ENST00000601091 FAM25AB3EWG3 89 aa10.1□□□□□ -0.79
LIG1-220ENST00000601091 FAM25CB3EWG5 89 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms