RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CHCHD4Q8N4Q1 142 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 SVOPQ8N4V2 548 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 SIMC1Q8NDZ2 872 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 DYNC2LI1Q8TCX1 351 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 USP7Q93009 1102 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 SAMD11Q96NU1 681 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 NFKBIL1Q9UBC1 381 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 PCDHGB1Q9Y5G3 927 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 TCF20Q9UGU0 1960 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 ARHGEF33A8MVX0 844 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 SLC16A5O15375 505 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 MAN1A2O60476 641 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 KCNK2O95069 426 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 HPRP00739 348 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 THRBP10828 461 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 PCMT1P22061 227 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 PDHA2P29803 388 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 GSK3BP49841 420 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 ARSFP54793 590 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 AP1S2P56377 157 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 ELAVL3Q14576 367 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 RSBN1Q5VWQ0 802 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 KRTCAP2Q8N6L1 136 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 LSM14AQ8ND56 463 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 HTRA1Q92743 480 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 MED8Q96G25 268 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 COQ10AQ96MF6 247 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 KCTD14Q9BQ13 255 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 DGCR6LQ9BY27 220 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 SLC29A3Q9BZD2 475 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 CCDC177Q9NQR7 707 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 DNAJC11Q9NVH1 559 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 USP22Q9UPT9 525 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 PMF1-BGLAPU3KQ54 211 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 C2orf16Q68DN1 1984 aa16.48■□□□□ 0.23
SHKBP1-205ENST00000594973 PLXNA2O75051 1894 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 NUP210Q8TEM1 1887 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 TAF4O00268 1085 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 MTHFD1P11586 935 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 ADRB3P13945 408 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 NCK1P16333 377 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 BDKRB1P46663 353 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 PRLHRP49683 370 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 C19orf57Q0VDD7 668 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 EPS8Q12929 822 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 DAG1Q14118 895 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 DPY19L1Q2PZI1 675 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 ADPRMQ3LIE5 342 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 FAM174BQ3ZCQ3 159 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 CACHD1Q5VU97 1274 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 RAET1GQ6H3X3 334 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 SUSD1Q6UWL2 747 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 NACC2Q96BF6 587 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 FAM129BQ96TA1 746 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 CCM2Q9BSQ5 444 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 PBX4Q9BYU1 374 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 C1orf109Q9NX04 203 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 QSOX1O00391 747 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 LZTS3O60299 673 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 PRAMEF4O60810 478 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 SOD1P00441 154 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 GSTM1P09488 218 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 C6P13671 934 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 FCARP24071 287 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 IST1P53990 364 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 PFN3P60673 137 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 SLC13A2Q13183 592 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 MAD2L1Q13257 205 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 PRAMEF9Q5VWM5 478 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 TBPL2Q6SJ96 375 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 NRSN1Q8IZ57 195 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 RNF175Q8N4F7 328 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 CHDHQ8NE62 594 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 TMIEQ8NEW7 156 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 TRIM63Q969Q1 353 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 NUS1Q96E22 293 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 EGLN2Q96KS0 407 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 ZBTB18Q99592 522 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 DPY30Q9C005 99 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 OR2AG1Q9H205 316 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 DSN1Q9H410 356 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 DYRK4Q9NR20 520 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 PAK1IP1Q9NWT1 392 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 SNX6Q9UNH7 406 aa16.47■□□□□ 0.23
SHKBP1-205ENST00000594973 EPOPA6NHQ4 379 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 RFXAPO00287 272 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 CCNKO75909 580 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 EPHX1P07099 455 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 IL12RB1P42701 662 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 MTPNP58546 118 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 CHIT1Q13231 466 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 EIF4HQ15056 248 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 VITQ6UXI7 678 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 DLEU7Q6UYE1 221 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 RALGPS2Q86X27 583 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 TRAPPC5Q8IUR0 188 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 PSMA8Q8TAA3 256 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 SUSD6Q92537 303 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 NODALQ96S42 347 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 BTBD2Q9BX70 525 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms