RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 TSPAN12O95859 305 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 CDH1P12830 882 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 NPPBP16860 134 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 IVDP26440 423 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 GABRB3P28472 473 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 ELK3P41970 407 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 PAFAH1B1P43034 410 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 TNFSF10P50591 281 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 ARG2P78540 354 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 MEF2AQ02078 507 aaPredicted RBP7.19□□□□□ -1.26
NPC1-208ENST00000590301 MGAT5Q09328 741 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 CBLBQ13191 982 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 PCOLCEQ15113 449 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 EXT1Q16394 746 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 PHKG1Q16816 387 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 KCTD19Q17RG1 926 aaPredicted RBP7.19□□□□□ -1.26
NPC1-208ENST00000590301 MSS51Q4VC12 460 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 C4orf17Q53FE4 359 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 TEDDM1Q5T9Z0 273 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 HECTD2Q5U5R9 776 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 ABHD17BQ5VST6 288 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 PLAG1Q6DJT9 500 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 HIBCHQ6NVY1 386 aaPredicted RBP7.19□□□□□ -1.26
NPC1-208ENST00000590301 LINC00696Q6ZRV3 163 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 MAMDC2Q7Z304 686 aaPredicted RBP7.19□□□□□ -1.26
NPC1-208ENST00000590301 SLC26A11Q86WA9 606 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 CREG2Q8IUH2 290 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 PLD3Q8IV08 490 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 DTWD1Q8N5C7 304 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 NKAPQ8N5F7 415 aaKnown RBP7.19□□□□□ -1.26
NPC1-208ENST00000590301 MFSD9Q8NBP5 474 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 PLPP7Q8NBV4 271 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 OR4K1Q8NGD4 311 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 OR1N1Q8NGS0 311 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 OR9A4Q8NGU2 314 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 OR56A3Q8NH54 315 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 BRIX1Q8TDN6 353 aaKnown RBP7.19□□□□□ -1.26
NPC1-208ENST00000590301 GRHL3Q8TE85 626 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 SLC13A3Q8WWT9 602 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 PSMF1Q92530 271 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 FBXL8Q96CD0 374 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 SNF8Q96H20 258 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 VPS39Q96JC1 886 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 CNDP1Q96KN2 507 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 IMMP1LQ96LU5 166 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 CYTH2Q99418 400 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 SLX1AQ9BQ83 275 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 VN1R1Q9GZP7 353 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 SYNPO2LQ9H987 977 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 ABCF3Q9NUQ8 709 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 TRMT1Q9NXH9 659 aaKnown RBP7.19□□□□□ -1.26
NPC1-208ENST00000590301 ZFATQ9P243 1243 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 PTGFRNQ9P2B2 879 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 NTNG1Q9Y2I2 539 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 SAR1BQ9Y6B6 198 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 TEX264Q9Y6I9 313 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 URADA6NGE7 173 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 MAGEB17A8MXT2 336 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 KLHL18O94889 574 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 SEC31AO94979 1220 aaKnown RBP7.18□□□□□ -1.26
NPC1-208ENST00000590301 LDLRP01130 860 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 CRYABP02511 175 aaKnown RBP7.18□□□□□ -1.26
NPC1-208ENST00000590301 F7P08709 466 aaPredicted RBP7.18□□□□□ -1.26
NPC1-208ENST00000590301 JAK1P23458 1154 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 AHRP35869 848 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 XCR1P46094 333 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 HNMTP50135 292 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 GNG11P61952 73 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 CDKL1Q00532 357 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 EEF1A2Q05639 463 aaKnown RBP7.18□□□□□ -1.26
NPC1-208ENST00000590301 RGS1Q08116 209 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 CSHL1Q14406 222 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 TSNAXIP1Q2TAA8 658 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.18□□□□□ -1.268e-7■■■■□ 19.8
NPC1-208ENST00000590301 MINDY4Q4G0A6 757 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 RBM20Q5T481 1227 aaKnown RBP7.18□□□□□ -1.26
NPC1-208ENST00000590301 MFSD4BQ5TF39 518 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 ABHD13Q7L211 337 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 CPEB2Q7Z5Q1 589 aaKnown RBP7.18□□□□□ -1.26
NPC1-208ENST00000590301 ADAMTSL2Q86TH1 951 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 IGDCC3Q8IVU1 814 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 LGI4Q8N135 537 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 AFAP1L2Q8N4X5 818 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 BBOF1Q8ND07 529 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 TRPV3Q8NET8 790 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 OR51Q1Q8NH59 317 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 DNAJB8Q8NHS0 232 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 SEC16BQ96JE7 1060 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 ZNF354BQ96LW1 612 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 NAPGQ99747 312 aaPredicted RBP7.18□□□□□ -1.26
NPC1-208ENST00000590301 ATG10Q9H0Y0 220 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 PLAC1Q9HBJ0 212 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 POPDC3Q9HBV1 291 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 OLAHQ9NV23 265 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 ABI3Q9P2A4 366 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 ERRFI1Q9UJM3 462 aaPredicted RBP7.18□□□□□ -1.26
NPC1-208ENST00000590301 PCDHGB6Q9Y5F9 930 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 CSAG2Q9Y5P2 127 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 KCNE2Q9Y6J6 123 aa7.18□□□□□ -1.26
NPC1-208ENST00000590301 PCSK5Q92824 1860 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms