RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 KLK8O60259 260 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 ALOX12BO75342 701 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 SUPT3HO75486 399 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 SORBS2O94875 1100 aaKnown RBP14.94□□□□□ -0.02
USB1-208ENST00000563207 UMODP07911 640 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 H2AFXP16104 143 aaPredicted RBP14.94□□□□□ -0.02
USB1-208ENST00000563207 NPPBP16860 134 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 KRT4P19013 534 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 AGXTP21549 392 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 CRHR1P34998 444 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 GCGRP47871 477 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 SLC6A12P48065 614 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 ALDH18A1P54886 795 aaKnown RBP14.94□□□□□ -0.02
USB1-208ENST00000563207 SLC18A2Q05940 514 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 ZXDCQ2QGD7 858 aaPredicted RBP14.94□□□□□ -0.02
USB1-208ENST00000563207 ZC3H12BQ5HYM0 836 aaKnown RBP14.94□□□□□ -0.02
USB1-208ENST00000563207 JMJD6Q6NYC1 403 aaPredicted RBP14.94□□□□□ -0.02
USB1-208ENST00000563207 MRGPREQ86SM8 312 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 TRABD2AQ86V40 505 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 C17orf64Q86WR6 236 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 CPT1CQ8TCG5 803 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 ALKBH8Q96BT7 664 aaKnown RBP14.94□□□□□ -0.02
USB1-208ENST00000563207 SCYL1Q96KG9 808 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 MESP1Q9BRJ9 268 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 ACAT2Q9BWD1 397 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 TMEM184CQ9NVA4 438 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 ZNF358Q9NW07 568 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 WWOXQ9NZC7 414 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 TNPO3Q9Y5L0 923 aaKnown RBP14.94□□□□□ -0.02
USB1-208ENST00000563207 KCNE2Q9Y6J6 123 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 OR2A25A4D2G3 310 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 NCF1BA6NI72 391 aaPredicted RBP14.93□□□□□ -0.02
USB1-208ENST00000563207 NCF1CA8MVU1 366 aaPredicted RBP14.93□□□□□ -0.02
USB1-208ENST00000563207 C9J4A7 227 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 GOLGA8RI6L899 631 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 UBXN8O00124 270 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 COPEO14579 308 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 RGS16O15492 202 aaPredicted RBP14.93□□□□□ -0.02
USB1-208ENST00000563207 SMIM24O75264 130 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 STK16O75716 305 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 MED26O95402 600 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 RNF224P0DH78 156 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 MTHFD2P13995 350 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 GFAPP14136 432 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 NCF1P14598 390 aaPredicted RBP14.93□□□□□ -0.02
USB1-208ENST00000563207 DCDP81605 110 aaKnown RBP14.93□□□□□ -0.02
USB1-208ENST00000563207 CCDC153Q494R4 210 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 CEP85LQ5SZL2 805 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 THOC6Q86W42 341 aaKnown RBP14.93□□□□□ -0.02
USB1-208ENST00000563207 MCATQ8IVS2 390 aaKnown RBP14.93□□□□□ -0.02
USB1-208ENST00000563207 METTL27Q8N6F8 245 aaPredicted RBP14.93□□□□□ -0.02
USB1-208ENST00000563207 UBTD2Q8WUN7 234 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 PYCR2Q96C36 320 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 C19orf60Q96EN9 201 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 PGM2Q96G03 612 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 PLCD4Q9BRC7 762 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 DPH7Q9BTV6 452 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 CD244Q9BZW8 370 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 STMN4Q9H169 189 aaPredicted RBP14.93□□□□□ -0.02
USB1-208ENST00000563207 ZBTB20Q9HC78 741 aaPredicted RBP14.93□□□□□ -0.02
USB1-208ENST00000563207 IRAK4Q9NWZ3 460 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 MKS1Q9NXB0 559 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 GPRC5BQ9NZH0 403 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 XPR1Q9UBH6 696 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 PLCL2Q9UPR0 1127 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 DYRK1BQ9Y463 629 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 MAP4K5Q9Y4K4 846 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 MAST4O15021 2626 aa14.93□□□□□ -0.02
USB1-208ENST00000563207 USP9XQ93008 2570 aaPredicted RBP14.92□□□□□ -0.02
USB1-208ENST00000563207 BLACEA4D250 179 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 STX16-NPEPL1H3BU86 382 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 STX16O14662 325 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 TAPBPO15533 448 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 SRPX2O60687 465 aaPredicted RBP14.92□□□□□ -0.02
USB1-208ENST00000563207 WDR47O94967 919 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 MYZAPP0CAP1 466 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 GNAZP19086 355 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 TAC1P20366 129 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 ALAS2P22557 587 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 CASP8Q14790 479 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 SETDB1Q15047 1291 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 NKAIN1Q4KMZ8 207 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 SLC6A19Q695T7 634 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 ZNF425Q6IV72 752 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 MRPL14Q6P1L8 145 aaKnown RBP14.92□□□□□ -0.02
USB1-208ENST00000563207 SHISA6Q6ZSJ9 500 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 TTLL10Q6ZVT0 673 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 LRRC70Q7Z2Q7 622 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 PPP1R32Q7Z5V6 425 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 TMEM151AQ8N4L1 468 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 ABHD11Q8NFV4 315 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 EXT2Q93063 718 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 SMC6Q96SB8 1091 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 DPH2Q9BQC3 489 aaPredicted RBP14.92□□□□□ -0.02
USB1-208ENST00000563207 SYNPO2LQ9H987 977 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 TMEM216Q9P0N5 145 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 IFT80Q9P2H3 777 aaPredicted RBP14.92□□□□□ -0.02
USB1-208ENST00000563207 SLC22A14Q9Y267 594 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 AP1M2Q9Y6Q5 423 aa14.92□□□□□ -0.02
USB1-208ENST00000563207 MDC1Q14676 2089 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms