RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 STC1P52823 247 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 BTN3A2P78410 334 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 CHAF1BQ13112 559 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 FAM189A2Q15884 450 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 ZNF678Q5SXM1 525 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 SLC36A4Q6YBV0 504 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 OR2AP1Q8NGE2 309 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 NR4A3Q92570 626 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 DHRS1Q96LJ7 313 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 BTBD1Q9H0C5 482 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 GKN1Q9NS71 199 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 SEC14L4Q9UDX3 406 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 GADD45AP24522 165 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 ACADVLP49748 655 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 DNASE1L3Q13609 305 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 PON3Q15166 354 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 TMCO2Q7Z6W1 182 aaPredicted RBP12.28□□□□□ -0.44
SYNM-203ENST00000560674 LRRTM4Q86VH4 590 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 MTMR14Q8NCE2 650 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 OR56A1Q8NGH5 318 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 SUSD3Q96L08 255 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 KCNA7Q96RP8 456 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 CCSER2Q9H7U1 834 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 GDF5P43026 501 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 RPS3AP61247 264 aaKnown RBP12.28□□□□□ -0.44
SYNM-203ENST00000560674 CYBRD1Q53TN4 286 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 C6orf89Q6UWU4 347 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 CAMKVQ8NCB2 501 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 C2CD4AQ8NCU7 369 aaPredicted RBP12.28□□□□□ -0.44
SYNM-203ENST00000560674 OR10Q1Q8NGQ4 319 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 SMPDL3AQ92484 453 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 SGCDQ92629 289 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 CD180Q99467 661 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 ZNF541Q9H0D2 1346 aa12.28□□□□□ -0.44
SYNM-203ENST00000560674 A0A0G2JLL6 359 aaPredicted RBP12.27□□□□□ -0.44
SYNM-203ENST00000560674 DLGAP1O14490 977 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 SOX14O95416 240 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 CLDN7O95471 211 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 FOSL2P15408 326 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 F8A1P23610 371 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 CTSOP43234 321 aaPredicted RBP12.27□□□□□ -0.44
SYNM-203ENST00000560674 SLC6A9P48067 706 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 DGKEP52429 567 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 TAS2R43P59537 309 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 ZNF33AQ06730 810 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 DSG2Q14126 1118 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 CHRDL2Q6WN34 429 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 HSDL2Q6YN16 418 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 PRRT2Q7Z6L0 340 aaPredicted RBP12.27□□□□□ -0.44
SYNM-203ENST00000560674 CENPSQ8N2Z9 138 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 JAGN1Q8N5M9 183 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 TSSK6Q9BXA6 273 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 RNF11Q9Y3C5 154 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 HCN4Q9Y3Q4 1203 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 PCDHGB2Q9Y5G2 931 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 C2orf92A0A1B0GVN3 265 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 A0A1W2PRU2 124 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 OR7A10O76100 309 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 ARSFP54793 590 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 OLIG2Q13516 323 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 FAM182AQ5T1J6 154 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 SLC15A3Q8IY34 581 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 TTYH2Q9BSA4 534 aa12.27□□□□□ -0.44
SYNM-203ENST00000560674 POLMQ9NP87 494 aaPredicted RBP12.27□□□□□ -0.44
SYNM-203ENST00000560674 NRP1O14786 923 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 ADAMTS3O15072 1205 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 MAN2A2P49641 1150 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 ENPP7Q6UWV6 458 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 LSM14AQ8ND56 463 aaKnown RBP12.27□□□□□ -0.45
SYNM-203ENST00000560674 RDH12Q96NR8 316 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 RNF121Q9H920 327 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 NDRG2Q9UN36 371 aaKnown RBP12.27□□□□□ -0.45
SYNM-203ENST00000560674 SLIT2O94813 1529 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 PRSS51A0A1B0GVH4 220 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.27□□□□□ -0.45
SYNM-203ENST00000560674 H0YGN5 161 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 PCDHGA12O60330 932 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 DLDP09622 509 aaKnown RBP12.27□□□□□ -0.45
SYNM-203ENST00000560674 TAS2R50P59544 299 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 GRSF1Q12849 480 aaKnown RBP eCLIP12.27□□□□□ -0.45
SYNM-203ENST00000560674 PPIGQ13427 754 aaKnown RBP eCLIP12.27□□□□□ -0.45
SYNM-203ENST00000560674 PTCHD3Q3KNS1 767 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 RPS27LQ71UM5 84 aaKnown RBP12.27□□□□□ -0.45
SYNM-203ENST00000560674 DBF4BQ8NFT6 615 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 OR2L2Q8NH16 312 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 HDAC2Q92769 488 aaKnown RBP12.27□□□□□ -0.45
SYNM-203ENST00000560674 RFT1Q96AA3 541 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 ISOC1Q96CN7 298 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 PREBQ9HCU5 417 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 GNG8Q9UK08 70 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 EXOSC1Q9Y3B2 195 aaKnown RBP12.27□□□□□ -0.45
SYNM-203ENST00000560674 NFS1Q9Y697 457 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 SCGB1D2O95969 90 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 GSTT2P0CG29 244 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 ZNF30P17039 623 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 CLCNKAP51800 687 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 MLLT6P55198 1093 aaPredicted RBP12.27□□□□□ -0.45
SYNM-203ENST00000560674 SEC23BQ15437 767 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 RELL1Q8IUW5 271 aa12.27□□□□□ -0.45
SYNM-203ENST00000560674 TRIM43Q96BQ3 446 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms