RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 WDR45BQ5MNZ6 344 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 DEPDC1Q5TB30 811 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 ANXA8L1Q5VT79 327 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 KHDRBS2Q5VWX1 349 aaKnown RBP13.22□□□□□ -0.29
TPM1-215ENST00000558868 ZFP1Q6P2D0 407 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 IKBIPQ70UQ0 350 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 COMMD6Q7Z4G1 85 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 SLC9B2Q86UD5 537 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 SLC15A3Q8IY34 581 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.22□□□□□ -0.29
TPM1-215ENST00000558868 SDR16C5Q8N3Y7 309 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 ZNF740Q8NDX6 193 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 VPS37AQ8NEZ2 397 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 GPR156Q8NFN8 814 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 OR4E2Q8NGC2 313 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 OR8J3Q8NGG0 315 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 SLC26A7Q8TE54 656 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 GTF2H4Q92759 462 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 NELL1Q92832 810 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 TMEM125Q96AQ2 219 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 CGREF1Q99674 301 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 EBPLQ9BY08 206 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 MS4A8Q9BY19 250 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 SPNS1Q9H2V7 528 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 OR51B5Q9H339 312 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 S100A14Q9HCY8 104 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 FAM120CQ9NX05 1096 aaKnown RBP13.22□□□□□ -0.29
TPM1-215ENST00000558868 ANKMY1Q9P2S6 941 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 MAN2B2Q9Y2E5 1009 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 PCDHA9Q9Y5H5 950 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 ENTPD2Q9Y5L3 495 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 PKD1L2Q7Z442 2459 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 PLXND1Q9Y4D7 1925 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 A0A096LPI6 279 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 PRORSD1PA6NEY8 169 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 H0Y3Z8 333 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 K7ESF4 209 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 NME4O00746 187 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 ACOT8O14734 319 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 CSF2P04141 144 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 DCNP07585 359 aaKnown RBP13.21□□□□□ -0.29
TPM1-215ENST00000558868 COX7A2P14406 83 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 NME1P15531 152 aaKnown RBP13.21□□□□□ -0.29
TPM1-215ENST00000558868 AHRP35869 848 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 TRPC1P48995 793 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 ARFIP1P53367 373 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 UBE2IP63279 158 aaKnown RBP13.21□□□□□ -0.29
TPM1-215ENST00000558868 ZXDAP98168 799 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 SLC34A1Q06495 639 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 MAP7Q14244 749 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 C6orf10Q5SRN2 563 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 ADNP2Q6IQ32 1131 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 NANOGP8Q6NSW7 305 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 DLEU7Q6UYE1 221 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 VN1R5Q7Z5H4 357 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 CAMKMTQ7Z624 323 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 GKN2Q86XP6 184 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 TMEM132CQ8N3T6 1108 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 RNF148Q8N7C7 305 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 TRPV3Q8NET8 790 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 TNIP2Q8NFZ5 429 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 OR8J2Q8NGG1 315 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 DNAJB14Q8TBM8 379 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 RGMAQ96B86 450 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 MTERF3Q96E29 417 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 SLC45A3Q96JT2 553 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 LRGUKQ96M69 825 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 SLC39A3Q9BRY0 314 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 SARGQ9BW04 601 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 NANOGQ9H9S0 305 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 TM9SF3Q9HD45 589 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 MYNNQ9NPC7 610 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 ATAD3AQ9NVI7 634 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 CMTM6Q9NX76 183 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 CPNE7Q9UBL6 633 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 SPASTQ9UBP0 616 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 MUTYHQ9UIF7 546 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 KLF15Q9UIH9 416 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 ADAM29Q9UKF5 820 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 INVSQ9Y283 1065 aa13.21□□□□□ -0.29
TPM1-215ENST00000558868 TRBV23OR9-2A0A075B6M9 112 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 PRAMEF33A0A0G2JMD5 474 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 ARHGAP10A1A4S6 786 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 SCAMP2O15127 329 aaKnown RBP13.2□□□□□ -0.3
TPM1-215ENST00000558868 MAP3K7O43318 606 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 AKAP10O43572 662 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 SH3BGRLO75368 114 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 SORBS2O94875 1100 aaKnown RBP13.2□□□□□ -0.3
TPM1-215ENST00000558868 LRATO95237 230 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 TCN1P20061 433 aaPredicted RBP13.2□□□□□ -0.3
TPM1-215ENST00000558868 PEBP1P30086 187 aaKnown RBP13.2□□□□□ -0.3
TPM1-215ENST00000558868 GCKP35557 465 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 TCEA2Q15560 299 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 DUOXA1Q1HG43 343 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 AASDHQ4L235 1098 aaPredicted RBP13.2□□□□□ -0.3
TPM1-215ENST00000558868 ZNF542PQ5EBM4 170 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 CPTPQ5TA50 214 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 ARMCX6Q7L4S7 300 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 C11orf74Q86VG3 221 aa13.2□□□□□ -0.3
TPM1-215ENST00000558868 DHFR2Q86XF0 187 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms