RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, human

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-222	ENST00000543627	B3GALT4	O96024	378 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	ALB	P02768	609 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	ALDOA	P04075	364 aa	Known RBP	10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	UMOD	P07911	640 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	ZGLP1	P0C6A0	271 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	C1GALT1C1L	P0DN25	315 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	GNAZ	P19086	355 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	RAB8A	P61006	207 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	SNRPN	P63162	240 aa	Known RBP	10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	OLR1	P78380	273 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	KLC1	Q07866	573 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	RGS1	Q08116	209 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	SLBP	Q14493	270 aa	Known RBP eCLIP	10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	PFKFB4	Q16877	469 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	MINDY4	Q4G0A6	757 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	CRTC2	Q53ET0	693 aa	Predicted RBP	10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	TOR1AIP1	Q5JTV8	583 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	GARNL3	Q5VVW2	1013 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	PRICKLE2	Q7Z3G6	844 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	LAPTM4B	Q86VI4	370 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	KRT78	Q8N1N4	520 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	PLD6	Q8N2A8	252 aa	Known RBP	10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	ZNF843	Q8N446	348 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	TEX9	Q8N6V9	391 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	LSM14A	Q8ND56	463 aa	Known RBP	10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	ABHD11	Q8NFV4	315 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	DCAKD	Q8WVC6	231 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	CCDC77	Q9BR77	488 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	CAPS2	Q9BXY5	557 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	RBCK1	Q9BYM8	510 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	CD244	Q9BZW8	370 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	SLC25A18	Q9H1K4	315 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	RHBG	Q9H310	441 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	L2HGDH	Q9H9P8	463 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	PELI2	Q9HAT8	420 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	P4HTM	Q9NXG6	502 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	NUDT4	Q9NZJ9	180 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	C3orf18	Q9UK00	162 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	SCN3A	Q9NY46	2000 aa		10.5	□□□□□ -0.73
DDB1-222	ENST00000543627	MDC1	Q14676	2089 aa	Known RBP	10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	KCNE1B	A0A087WTH5	132 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627		A0A0G2JN53	185 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	ANKDD1B	A6NHY2	528 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	SYCE1L	A8MT33	242 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	ESPN	B1AK53	854 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627		K7EM74	188 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	FOXS1	O43638	330 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	KERA	O60938	352 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	SH3BGRL	O75368	114 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	RDH16	O75452	317 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	KLHL2	O95198	593 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	RECK	O95980	971 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	UQCRH	P07919	91 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	SNRPA	P09012	282 aa	Known RBP	10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	ZNF888	P0CJ79	500 aa	Predicted RBP	10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	MYBL2	P10244	700 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	PCNA	P12004	261 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	CXCR2	P25025	360 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	GCGR	P47871	477 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	SCTR	P47872	440 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	SLC6A12	P48065	614 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	EMP2	P54851	167 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	RRAD	P55042	308 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	IRF8	Q02556	426 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	RELA	Q04206	551 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	ACAP2	Q15057	778 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	PDK4	Q16654	411 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	HIST2H2AC	Q16777	129 aa	Predicted RBP	10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	HIST2H2AA3	Q6FI13	130 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	MED25	Q71SY5	747 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	MRGPRE	Q86SM8	312 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	ZNF605	Q86T29	641 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	PARP9	Q8IXQ6	854 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	CENPL	Q8N0S6	344 aa	Predicted RBP	10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	CLEC1A	Q8NC01	280 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	OR4K1	Q8NGD4	311 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	ADAMTS17	Q8TE56	1095 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	FKBP10	Q96AY3	582 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	C8orf44	Q96CB5	159 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	PHF21B	Q96EK2	531 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	FER1L6-AS2	Q96M78	137 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	SLC25A23	Q9BV35	468 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	ADNP	Q9H2P0	1102 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	OPTC	Q9UBM4	332 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	ZFP69B	Q9UJL9	534 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	PTBP2	Q9UKA9	531 aa	Known RBP	10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	NXT1	Q9UKK6	140 aa	Known RBP	10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	MKL2	Q9ULH7	1088 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	G3BP2	Q9UN86	482 aa	Known RBP	10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	TP53TG5	Q9Y2B4	290 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	NAALAD2	Q9Y3Q0	740 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	PIEZO2	Q9H5I5	2752 aa		10.49	□□□□□ -0.73
DDB1-222	ENST00000543627	IQANK1	A0A1B0GTG1	560 aa		10.48	□□□□□ -0.73
DDB1-222	ENST00000543627	OR2W5	A6NFC9	320 aa		10.48	□□□□□ -0.73
DDB1-222	ENST00000543627	LRRC14B	A6NHZ5	514 aa		10.48	□□□□□ -0.73
DDB1-222	ENST00000543627	GOLGA8R	I6L899	631 aa		10.48	□□□□□ -0.73
DDB1-222	ENST00000543627	MAP2K7	O14733	419 aa		10.48	□□□□□ -0.73
DDB1-222	ENST00000543627	JRK	O75564	520 aa		10.48	□□□□□ -0.73
DDB1-222	ENST00000543627	CDC123	O75794	336 aa	Predicted RBP	10.48	□□□□□ -0.73
DDB1-222	ENST00000543627	C1QL1	O75973	258 aa		10.48	□□□□□ -0.73

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