RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 TIMM29Q9BSF4 260 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 SRMSQ9H3Y6 488 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 ARHGEF3Q9NR81 526 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 DDX28Q9NUL7 540 aaKnown RBP4.8□□□□□ -1.64
PTPN13-209ENST00000511467 PLCE1Q9P212 2302 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 NCOA6Q14686 2063 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-209ENST00000511467 ARPC2O15144 300 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 SKAP2O75563 359 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-209ENST00000511467 IFI6P09912 130 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 IRF1P10914 325 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 CYBAP13498 195 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 ATP1B2P14415 290 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-209ENST00000511467 FDXRP22570 491 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 NUBP1P53384 320 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 TAS2R31P59538 309 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 CTBSQ01459 385 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 MLLT1Q03111 559 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-209ENST00000511467 GPM6BQ13491 265 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 GGTA1PQ4G0N0 100 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 KIAA0895LQ68EN5 471 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 CUZD1Q86UP6 607 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 AMIGO1Q86WK6 493 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 CDYL2Q8N8U2 506 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 C1orf127Q8N9H9 656 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 C2CD4AQ8NCU7 369 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-209ENST00000511467 HPS1Q92902 700 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF689Q96CS4 500 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-209ENST00000511467 DHRS1Q96LJ7 313 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 NPY6RQ99463 290 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 SLCO5A1Q9H2Y9 848 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 EHD3Q9NZN3 535 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 SH3GLB1Q9Y371 365 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-209ENST00000511467 PRSS51A0A1B0GVH4 220 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-209ENST00000511467 NAP1L6A6NFF2 107 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 TIMP1P01033 207 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 CSTF2P33240 577 aaKnown RBP eCLIP4.8□□□□□ -1.64
PTPN13-209ENST00000511467 IL5RAQ01344 420 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 PAN3Q58A45 887 aaKnown RBP4.8□□□□□ -1.64
PTPN13-209ENST00000511467 HGSNATQ68CP4 663 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 METAP1DQ6UB28 335 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-209ENST00000511467 APTXQ7Z2E3 356 aaKnown RBP4.8□□□□□ -1.64
PTPN13-209ENST00000511467 CYP2U1Q7Z449 544 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 PTAR1Q7Z6K3 402 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-209ENST00000511467 MS4A15Q8N5U1 240 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 OR4A15Q8NGL6 344 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 BCAS3Q9H6U6 928 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 TM9SF3Q9HD45 589 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 TBCCD1Q9NVR7 557 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 CACNA1BQ00975 2339 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 TCF20Q9UGU0 1960 aaKnown RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CIB4A0PJX0 185 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 TOR1AO14656 332 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ATP6V1G2O95670 118 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 GSTT2P0CG29 244 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CD44P16070 742 aaKnown RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CDK2P24941 298 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 NAGLUP54802 743 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 LMAN2Q12907 356 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 TRAM2Q15035 370 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 UPP1Q16831 310 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ACTBL2Q562R1 376 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 PRAMEF14Q5SWL7 426 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 PRAMEF13Q5VWM6 474 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CMIPQ8IY22 773 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 EDEM1Q92611 657 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ZCWPW1Q9H0M4 648 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 IFT46Q9NQC8 304 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CCDC167Q9P0B6 97 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 A0A0J9YYE9 177 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 OR6C70A6NIJ9 312 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CDK14O94921 469 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CST1P01037 141 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 GOT1P17174 413 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 SLC9A3P48764 834 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF84P51523 738 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 MTTPP55157 894 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 SRPXP78539 464 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 TEKQ02763 1124 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ENPP2Q13822 863 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 VEZF1Q14119 521 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 QPRTQ15274 297 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 EXOC3L2Q2M3D2 409 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF628Q5EBL2 1059 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 PITRM1Q5JRX3 1037 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 OR52E8Q6IFG1 317 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 KIAA1211LQ6NV74 962 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CILP2Q8IUL8 1156 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 RNF113BQ8IZP6 322 aaKnown RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 INO80EQ8NBZ0 244 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 OR1J2Q8NGS2 313 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 FBXO30Q8TB52 745 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 PPP1R14AQ96A00 147 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 SLC41A3Q96GZ6 507 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 NUDT16L1Q9BRJ7 211 aaKnown RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 GPRC5CQ9NQ84 441 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 CCM2LQ9NUG4 571 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-209ENST00000511467 FAM86C1Q9NVL1 165 aa4.79□□□□□ -1.64
PTPN13-209ENST00000511467 GPR83Q9NYM4 423 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms