RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 BRIX1Q8TDN6 353 aaKnown RBP10.05□□□□□ -0.8
NELFE-213ENST00000494956 SLC13A3Q8WWT9 602 aa10.05□□□□□ -0.8
NELFE-213ENST00000494956 ESAMQ96AP7 390 aa10.05□□□□□ -0.8
NELFE-213ENST00000494956 MVB12AQ96EY5 273 aa10.05□□□□□ -0.8
NELFE-213ENST00000494956 VN1R1Q9GZP7 353 aa10.05□□□□□ -0.8
NELFE-213ENST00000494956 PCBD2Q9H0N5 130 aa10.05□□□□□ -0.8
NELFE-213ENST00000494956 RHOJQ9H4E5 214 aa10.05□□□□□ -0.8
NELFE-213ENST00000494956 MKKSQ9NPJ1 570 aaPredicted RBP10.05□□□□□ -0.8
NELFE-213ENST00000494956 PLA2G3Q9NZ20 509 aa10.05□□□□□ -0.8
NELFE-213ENST00000494956 WHRNQ9P202 907 aa10.05□□□□□ -0.8
NELFE-213ENST00000494956 PTGFRNQ9P2B2 879 aa10.05□□□□□ -0.8
NELFE-213ENST00000494956 CORO1CQ9ULV4 474 aaPredicted RBP10.05□□□□□ -0.8
NELFE-213ENST00000494956 VPS4AQ9UN37 437 aa10.05□□□□□ -0.8
NELFE-213ENST00000494956 B3GNT3Q9Y2A9 372 aa10.05□□□□□ -0.8
NELFE-213ENST00000494956 ESPL1Q14674 2120 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 CNTRLQ7Z7A1 2325 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 KCNE1BA0A087WTH5 132 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 IGHV1-45A0A0A0MS14 117 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 NSG1A0A0A6YYJ2 146 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 TCRBV9S1A1TA0A576 114 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 ESYT3A0FGR9 886 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 C4orf51C9J302 202 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 TXNDC9O14530 226 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 SEMA7AO75326 666 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 WISP3O95389 354 aaPredicted RBP10.04□□□□□ -0.8
NELFE-213ENST00000494956 NSA2O95478 260 aaKnown RBP10.04□□□□□ -0.8
NELFE-213ENST00000494956 ALPPP05187 535 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 PRR35P0CG20 571 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 ITGAMP11215 1152 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 HRH2P25021 359 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 VARSP26640 1264 aaKnown RBP10.04□□□□□ -0.8
NELFE-213ENST00000494956 HNF4AP41235 474 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 XCR1P46094 333 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 AVPR1BP47901 424 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 CCR8P51685 355 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 AP1S2P56377 157 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 CALCOCO2Q13137 446 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 PCOLCEQ15113 449 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 NR6A1Q15406 480 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 NDUFA9Q16795 377 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 MINDY4Q4G0A6 757 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 CRB2Q5IJ48 1285 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 AGAP7PQ5VUJ5 663 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 HIST2H2BCQ6DN03 193 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 ZDHHC24Q6UX98 284 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 IGFL3Q6UXB1 125 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 Q6ZS92 163 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 THOC6Q86W42 341 aaKnown RBP10.04□□□□□ -0.8
NELFE-213ENST00000494956 ANKRD53Q8N9V6 530 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 GALNT11Q8NCW6 608 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 BBOF1Q8ND07 529 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 ABHD11Q8NFV4 315 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 OR4K1Q8NGD4 311 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 OR51Q1Q8NH59 317 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 FBXO25Q8TCJ0 367 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 PSMF1Q92530 271 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 NACC2Q96BF6 587 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 PEX11GQ96HA9 241 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 PDLIM5Q96HC4 596 aaKnown RBP10.04□□□□□ -0.8
NELFE-213ENST00000494956 AGAP4Q96P64 663 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 EGFL8Q99944 293 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 WDR77Q9BQA1 342 aaPredicted RBP10.04□□□□□ -0.8
NELFE-213ENST00000494956 HAUS8Q9BT25 410 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 TRIM54Q9BYV2 358 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 AICDAQ9GZX7 198 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 LHPPQ9H008 270 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 ILKAPQ9H0C8 392 aaPredicted RBP10.04□□□□□ -0.8
NELFE-213ENST00000494956 GPAMQ9HCL2 828 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 C14orf105Q9NVL8 296 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 NOVA2Q9UNW9 492 aaKnown RBP10.04□□□□□ -0.8
NELFE-213ENST00000494956 SLC22A14Q9Y267 594 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 NAALAD2Q9Y3Q0 740 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 FLNBO75369 2602 aaKnown RBP10.04□□□□□ -0.8
NELFE-213ENST00000494956 RELNP78509 3460 aa10.04□□□□□ -0.8
NELFE-213ENST00000494956 FLNCQ14315 2725 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 TRBC2A0A5B9 178 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 BLACEA4D250 179 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 PABPN1LA6NDY0 278 aaKnown RBP10.03□□□□□ -0.8
NELFE-213ENST00000494956 FAM159BA6NKW6 160 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 TAPBPO15533 448 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 PRPF4O43172 522 aaKnown RBP eCLIP10.03□□□□□ -0.8
NELFE-213ENST00000494956 NDUFS4O43181 175 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 SEC24DO94855 1032 aaPredicted RBP10.03□□□□□ -0.8
NELFE-213ENST00000494956 ZNF888P0CJ79 500 aaPredicted RBP10.03□□□□□ -0.8
NELFE-213ENST00000494956 CCND1P24385 295 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 CXCR2P25025 360 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 CBLBQ13191 982 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 CSHL1Q14406 222 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 USP10Q14694 798 aaKnown RBP10.03□□□□□ -0.8
NELFE-213ENST00000494956 DEFB134Q4QY38 66 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 TMEM205Q6UW68 189 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 IGFL2Q6UWQ7 119 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 C3orf62Q6ZUJ4 267 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 NDUFAF7Q7L592 441 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 MAATS1Q7Z4T9 603 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 TMPRSS11BQ86T26 416 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 IQCKQ8N0W5 287 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 FAM26EQ8N5C1 309 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 NKAPQ8N5F7 415 aaKnown RBP10.03□□□□□ -0.8
NELFE-213ENST00000494956 CAMKVQ8NCB2 501 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms