RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 CEBPZQ03701 1054 aaKnown RBP4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 CSTF3Q12996 717 aaKnown RBP4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 IFT88Q13099 833 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 SF3A2Q15428 464 aaKnown RBP4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 UBE2SQ16763 222 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 FUT10Q6P4F1 479 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 PACS1Q6VY07 963 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 R3HCC1LQ7Z5L2 792 aaKnown RBP4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 PLA2G4DQ86XP0 818 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 RASGEF1CQ8N431 466 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 TTC30BQ8N4P2 665 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 SLC5A8Q8N695 610 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 WDR20Q8TBZ3 569 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 PPP4R1Q8TF05 950 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 C17orf50Q8WW18 174 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 ZNF396Q96N95 335 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 PSD2Q9BQI7 771 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 APOL6Q9BWW8 343 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 C8orf33Q9H7E9 229 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 PREBQ9HCU5 417 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 ASH1LQ9NR48 2969 aaKnown RBP4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 ADPRHL2Q9NX46 363 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 MARCH5Q9NX47 278 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 ADAM28Q9UKQ2 775 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 R3HDM2Q9Y2K5 976 aaKnown RBP4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 PRG3Q9Y2Y8 225 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 NEUROG3Q9Y4Z2 214 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 PDCD11Q14690 1871 aaKnown RBP4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 IGF2RP11717 2491 aa4.4□□□□□ -1.7
HMGB3P5-201ENST00000428894 NUP205Q92621 2012 aa4.4□□□□□ -1.7
HMGB3P5-201ENST00000428894 IGKV3D-20A0A0C4DH25 116 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 A0A1W2PPH5 198 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 SMCO2A6NFE2 343 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 CCDC69A6NI79 296 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 H0Y626 953 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 ZNF263O14978 683 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 CCL16O15467 120 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 SYNCRIPO60506 623 aaKnown RBP4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 CSDE1O75534 798 aaKnown RBP4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 AKAP3O75969 853 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 RHOBTB1O94844 696 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 TRIM16O95361 564 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 TSHBP01222 138 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 IGLV1-44P01699 117 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 CCDC192P0DO97 292 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 KRT5P13647 590 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 AXLP30530 894 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 GDI1P31150 447 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 NAPAP54920 295 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 IRX1P78414 480 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 NTHL1P78549 312 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 MRPS34P82930 218 aaKnown RBP4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 ELAVL2Q12926 359 aaKnown RBP4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 ZSCAN26Q16670 478 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 DUOXA1Q1HG43 343 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 SOWAHCQ53LP3 525 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 AP1ARQ63HQ0 302 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 C16orf87Q6PH81 154 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 ZSCAN30Q86W11 494 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 IQCF2Q8IXL9 164 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 ZNF713Q8N859 430 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 SLC38A9Q8NBW4 561 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 TMEM116Q8NCL8 245 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 ITFG1Q8TB96 612 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 ZNF473Q8WTR7 871 aaKnown RBP4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 DEPDC1BQ8WUY9 529 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 CCDC51Q96ER9 411 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 SENP5Q96HI0 755 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 EGLN2Q96KS0 407 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 ZNF599Q96NL3 588 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 ASCL2Q99929 193 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 GPR88Q9GZN0 384 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 IQCGQ9H095 443 aaKnown RBP4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 RAD21L1Q9H4I0 556 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 POLR1BQ9H9Y6 1135 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 AGPAT5Q9NUQ2 364 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 IRAK4Q9NWZ3 460 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 SUCLA2Q9P2R7 463 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 FBXW11Q9UKB1 542 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 PIAS3Q9Y6X2 628 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 SF3B1O75533 1304 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 SHROOM3Q8TF72 1996 aa4.4□□□□□ -1.71
HMGB3P5-201ENST00000428894 TICRRQ7Z2Z1 1910 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 HELZ2Q9BYK8 2649 aaKnown RBP4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 IGKV6-21A0A0C4DH24 114 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 A0A1W2PQF6 199 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 ARL5CA6NH57 179 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 SHISA7A6NL88 538 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 FAM86B1E9PN63 330 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 DKC1O60832 514 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 ERLIN2O94905 339 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 LIPFP07098 398 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 FAM86B2P0C5J1 330 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 CCNE1P24864 410 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 MAGEA8P43361 318 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 CTSCP53634 463 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 CASP6P55212 293 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 CD81P60033 236 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 PRKCEQ02156 737 aa4.39□□□□□ -1.71
HMGB3P5-201ENST00000428894 SRSF5Q13243 272 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms