RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 KDELR2P33947 212 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 CD68P34810 354 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 PREPP48147 710 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 GRSF1Q12849 480 aaKnown RBP eCLIP16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 ZNF423Q2M1K9 1284 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 RNASE12Q5GAN4 147 aaKnown RBP16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 KIAA1161Q6NSJ0 714 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 ANKFN1Q8N957 763 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 FBXL8Q96CD0 374 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 TRIM2Q9C040 744 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 COMMD4Q9H0A8 199 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 ZNF696Q9H7X3 374 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 LIN28AQ9H9Z2 209 aaKnown RBP16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 RCBTB2O95199 551 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 FCHO2Q0JRZ9 810 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 MADCAM1Q13477 382 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 ZBED3Q96IU2 234 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 CNDP2Q96KP4 475 aaKnown RBP16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 POLMQ9NP87 494 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 NFKBIL1Q9UBC1 381 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 SCAMP1O15126 338 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 C6orf47O95873 294 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 PGGT1BP53609 377 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 SEC13P55735 322 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 LCN8Q6JVE9 175 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 MND1Q9BWT6 205 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 MGAT4BQ9UQ53 548 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 FAM172BPA6NC97 362 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 FGF18O76093 207 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 ZNF865P0CJ78 1059 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 ACRV1P26436 265 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 GKP32189 559 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 GMPRP36959 345 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 FADDQ13158 208 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 C2orf27AQ580R0 203 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 CLEC12AQ5QGZ9 265 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 TRNT1Q96Q11 434 aaKnown RBP16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 PIGUQ9H490 435 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 WDR6Q9NNW5 1121 aaKnown RBP16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 TNFRSF10DQ9UBN6 386 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 RNF6Q9Y252 685 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 NDUFS4O43181 175 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 HLA-DPB1P04440 258 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 CHRM1P11229 460 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 IL4RP24394 825 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 ENPP7Q6UWV6 458 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 DPY19L3Q6ZPD9 716 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 ABHD13Q7L211 337 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 GRPEL2Q8TAA5 225 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 TNFAIP8L1Q8WVP5 186 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 SCAMP4Q969E2 229 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 GLYATL1Q969I3 302 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 TP53INP1Q96A56 240 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 ISOC1Q96CN7 298 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 TAPBPLQ9BX59 468 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 SEC14L4Q9UDX3 406 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 TMA7Q9Y2S6 64 aaKnown RBP16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 BACE2Q9Y5Z0 518 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 MYO9BQ13459 2157 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 PDCD5O14737 125 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 GBX2P52951 348 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 SH3BP2P78314 561 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 ABATP80404 500 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 PITPNAQ00169 270 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 FAM46DQ8NEK8 389 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 OR4K1Q8NGD4 311 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 MAPK15Q8TD08 544 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 NCSTNQ92542 709 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 SIPA1Q96FS4 1042 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 GAL3ST4Q96RP7 486 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 GFM1Q96RP9 751 aaKnown RBP16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 TCF7L1Q9HCS4 588 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 TAS2R9Q9NYW1 312 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 PCDHB11Q9Y5F2 797 aa16.54■□□□□ 0.24
TRAPPC11-201ENST00000334690 M0QZQ0 153 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 ZCCHC12Q6PEW1 402 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 SHQ1Q6PI26 577 aaKnown RBP16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 ZFP3Q96NJ6 502 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 CDH7Q9ULB5 785 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 PPIEQ9UNP9 301 aaKnown RBP16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 FAM170BA6NMN3 283 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 MEIS3P2A8K0S8 358 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 TMEM150CB9EJG8 249 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 GRID2O43424 1007 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 CHRNA1P02708 482 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 FSHRP23945 695 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 TEAD2Q15562 447 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 GPR68Q15743 365 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 IDNKQ5T6J7 187 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 OR6K6Q8NGW6 343 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 ARNTL2Q8WYA1 636 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 ZSWIM3Q96MP5 696 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 COPS7AQ9UBW8 275 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 RHPN2P1A8MT19 583 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 CAPN5O15484 640 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 GSRP00390 522 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 PFKMP08237 780 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 OR2B6P58173 313 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 ZNF805Q5CZA5 627 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 MRPL10Q7Z7H8 261 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms