RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 PCDHB1Q9Y5F3 818 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 HTR3EA5X5Y0 456 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 FARS2O95363 451 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 ANGPTL1O95841 491 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 HOXC6P09630 235 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 PIWIL4Q7Z3Z4 852 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 PGM2Q96G03 612 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 SERTAD4Q9NUC0 356 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 STK16O75716 305 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 SLC26A9Q7LBE3 791 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 FUKQ8N0W3 1084 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 OR52E4Q8NGH9 312 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 GNB4Q9HAV0 340 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 GGT5P36269 586 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 FIGNL1Q6PIW4 674 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 TMEM192Q8IY95 271 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 ERMAPQ96PL5 475 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 RHOJQ9H4E5 214 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 GRHPRQ9UBQ7 328 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 ERVW-1Q9UQF0 538 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 RIMBP3CA6NJZ7 1639 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 RIMBP3BA6NNM3 1639 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 RIMBP3Q9UFD9 1639 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 IQGAP1P46940 1657 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 OR6C6A6NF89 314 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 CILPO75339 1184 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 JUPP14923 745 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 NUDT6P53370 316 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 TRIM74Q86UV6 250 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 AMZ2Q86W34 360 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 LIX1LQ8IVB5 337 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 KCNJ9Q92806 393 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 PRICKLE3O43900 615 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 CLN5O75503 358 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 NDST3O95803 873 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 NR4A2P43354 598 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 VSX2P58304 361 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 AP3S2P59780 193 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 RUNX2Q13950 521 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 RDH12Q96NR8 316 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 LAMP5Q9UJQ1 280 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 UTS2RQ9UKP6 389 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 PRAMEF12O95522 483 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 MOGSQ13724 837 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 SCARB2Q14108 478 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 POTEHQ6S545 545 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 UHRF1Q96T88 793 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 TAS2R1Q9NYW7 299 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 PCDH10Q9P2E7 1040 aa16.53■□□□□ 0.24
CACNA1A-253ENST00000637927 A0A0G2JPF8 293 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 HNRNPCL3B7ZW38 293 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 POP4O95707 220 aaKnown RBP16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 HNRNPCL4P0DMR1 293 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 PLP2Q04941 152 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 SHISA6Q6ZSJ9 500 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 BBS12Q6ZW61 710 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 DBF4BQ8NFT6 615 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 OR13C4Q8NGS5 318 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 HMGXB4Q9UGU5 601 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 CAPN8A6NHC0 703 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 KHKP50053 298 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 RMI1Q9H9A7 625 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 FZD10Q9ULW2 581 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 TCAF1Q9Y4C2 921 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 FRMPD1Q5SYB0 1578 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 UPK3BL1B0FP48 263 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 UPK3BL2E5RIL1 263 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 ATP5A1P25705 553 aaKnown RBP16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 XKP51811 444 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 GAD2Q05329 585 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 PLD5Q8N7P1 536 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 ALG3Q92685 438 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 NSMCE3Q96MG7 304 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 TRPS1Q9UHF7 1281 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 ZNF451Q9Y4E5 1061 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 WNT6Q9Y6F9 365 aa16.52■□□□□ 0.24
CACNA1A-253ENST00000637927 MAGEB17A8MXT2 336 aa16.52■□□□□ 0.23
CACNA1A-253ENST00000637927 AIREO43918 545 aa16.52■□□□□ 0.23
CACNA1A-253ENST00000637927 PVALBP20472 110 aaPredicted RBP16.52■□□□□ 0.23
CACNA1A-253ENST00000637927 ZNF311Q5JNZ3 666 aa16.52■□□□□ 0.23
CACNA1A-253ENST00000637927 C15orf52Q6ZUT6 534 aaKnown RBP16.52■□□□□ 0.23
CACNA1A-253ENST00000637927 ARCQ7LC44 396 aa16.52■□□□□ 0.23
CACNA1A-253ENST00000637927 MED16Q9Y2X0 877 aa16.52■□□□□ 0.23
CACNA1A-253ENST00000637927 CRHR2Q13324 411 aa16.52■□□□□ 0.23
CACNA1A-253ENST00000637927 MFSD8Q8NHS3 518 aa16.52■□□□□ 0.23
CACNA1A-253ENST00000637927 NFKBIDQ8NI38 313 aa16.52■□□□□ 0.23
CACNA1A-253ENST00000637927 SLC35A5Q9BS91 424 aa16.52■□□□□ 0.23
CACNA1A-253ENST00000637927 SLC6A16Q9GZN6 736 aa16.52■□□□□ 0.23
CACNA1A-253ENST00000637927 TCAF2A6NFQ2 919 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 LDOC1O95751 146 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 CD2P06729 351 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 RIDAP52758 137 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 RPS24P62847 133 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 FAM92BQ6ZTR7 304 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 RPS27LQ71UM5 84 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 WACQ9BTA9 647 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 OR2S2Q9NQN1 319 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 IFT80Q9P2H3 777 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 USP32Q8NFA0 1604 aa16.51■□□□□ 0.23
CACNA1A-253ENST00000637927 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms