RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 AGTRAPQ6RW13 159 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 TMEM205Q6UW68 189 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 STRA8Q7Z7C7 330 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 ZC3H7AQ8IWR0 971 aaKnown RBP7.21□□□□□ -1.26
NPC1-208ENST00000590301 PRSS58Q8IYP2 241 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 AMER3Q8N944 861 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 GPATCH11Q8N954 259 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 PPFIBP2Q8ND30 876 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 ST6GALNAC3Q8NDV1 305 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 EEF1AKMT1Q8WVE0 214 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 METTL21AQ8WXB1 218 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 ANKRD7Q92527 254 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 C19orf60Q96EN9 201 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 CERS2Q96G23 380 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 PRAP1Q96NZ9 151 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 TUBB6Q9BUF5 446 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 SARGQ9BW04 601 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 YIPF2Q9BWQ6 316 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 RNF32Q9H0A6 362 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 ZNF700Q9H0M5 742 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 CLK4Q9HAZ1 481 aaKnown RBP7.21□□□□□ -1.26
NPC1-208ENST00000590301 ZBTB20Q9HC78 741 aaPredicted RBP7.21□□□□□ -1.26
NPC1-208ENST00000590301 RNF14Q9UBS8 474 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 PLEKHB1Q9UF11 243 aaPredicted RBP7.21□□□□□ -1.26
NPC1-208ENST00000590301 C19orf25Q9UFG5 118 aaPredicted RBP7.21□□□□□ -1.26
NPC1-208ENST00000590301 TEKT2Q9UIF3 430 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 MKL2Q9ULH7 1088 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 PDE10AQ9Y233 779 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 SLC5A6Q9Y289 635 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 SLC22A7Q9Y694 548 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 UTP20O75691 2785 aaKnown RBP7.21□□□□□ -1.26
NPC1-208ENST00000590301 NOTCH2Q04721 2471 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 A0A0A6YYC8 382 aaPredicted RBP7.2□□□□□ -1.26
NPC1-208ENST00000590301 TRAV17A0A0B4J275 112 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 WIPF3A6NGB9 483 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 CCDC188H7C350 402 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 I3L1I5 382 aaPredicted RBP7.2□□□□□ -1.26
NPC1-208ENST00000590301 CDK2AP1O14519 115 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 P2RX6O15547 441 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 SEMA7AO75326 666 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 ALOX12BO75342 701 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 WFS1O76024 890 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 AHSGP02765 367 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 UQCRHP07919 91 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 C8orf89P0DMQ9 161 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 EDN3P14138 238 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 BCL6P41182 706 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 AGTR2P50052 363 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 CCR8P51685 355 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 CDKN2DP55273 166 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 ARL4CP56559 192 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 PER3P56645 1201 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 CSNK1G2P78368 415 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 TIAL1Q01085 375 aaKnown RBP eCLIP7.2□□□□□ -1.26
NPC1-208ENST00000590301 DR1Q01658 176 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 Q0VFX4 171 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 NAE1Q13564 534 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 PWP1Q13610 501 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 HERC3Q15034 1050 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 HIF1AQ16665 826 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 EIF2S3LQ2VIR3 472 aaKnown RBP7.2□□□□□ -1.26
NPC1-208ENST00000590301 BBS9Q3SYG4 887 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 STEAP4Q687X5 459 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 DUPD1Q68J44 220 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 FAM45BPQ6NSW5 357 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 TMEM214Q6NUQ4 689 aaKnown RBP7.2□□□□□ -1.26
NPC1-208ENST00000590301 PAQR3Q6TCH7 311 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 FAM180AQ6UWF9 173 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 LCTLQ6UWM7 567 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 LYPD8Q6UX82 237 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 VN1R4Q7Z5H5 301 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 ASPGQ86U10 573 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 LAPTM4BQ86VI4 370 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 TMEM151BQ8IW70 566 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 BCORP1Q8N888 145 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 ABHD11Q8NFV4 315 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 SUN3Q8TAQ9 357 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 FAM45AQ8TCE6 357 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 FAR1Q8WVX9 515 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 ANP32BQ92688 251 aaKnown RBP7.2□□□□□ -1.26
NPC1-208ENST00000590301 HAS2Q92819 552 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 C8orf44Q96CB5 159 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 TM4SF19Q96DZ7 209 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 LINGO1Q96FE5 620 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 PDLIM5Q96HC4 596 aaKnown RBP7.2□□□□□ -1.26
NPC1-208ENST00000590301 C5orf34Q96MH7 638 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 OR1F2PQ96R84 312 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 NDNQ99608 321 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 DDX47Q9H0S4 455 aaKnown RBP7.2□□□□□ -1.26
NPC1-208ENST00000590301 ANKHQ9HCJ1 492 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 PPANQ9NQ55 473 aaKnown RBP7.2□□□□□ -1.26
NPC1-208ENST00000590301 ARL15Q9NXU5 204 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 NSMCE4AQ9NXX6 385 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 ADAMTS6Q9UKP5 1117 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 VWA7Q9Y334 891 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 MRPS2Q9Y399 296 aaKnown RBP7.2□□□□□ -1.26
NPC1-208ENST00000590301 CENPEQ02224 2701 aa7.2□□□□□ -1.26
NPC1-208ENST00000590301 TRBC2A0A5B9 178 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 CYSRT1A8MQ03 144 aa7.19□□□□□ -1.26
NPC1-208ENST00000590301 MASP2O00187 686 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms