RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 SNAP47Q5SQN1 464 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 C10orf120Q5SQS8 335 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 GDPGP1Q6ZNW5 385 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 ZNF438Q7Z4V0 828 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 SLC7A6Q92536 515 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 ELMO1Q92556 727 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 MTFMTQ96DP5 389 aaKnown RBP17.01■□□□□ 0.31
RAB40C-205ENST00000539661 TPD52L3Q96J77 140 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 EXOC2Q96KP1 924 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 GON7Q9BXV9 100 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 RRAGCQ9HB90 399 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 IL17CQ9P0M4 197 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 PCDHGC4Q9Y5F7 938 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 SNX8Q9Y5X2 465 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 V9GYH0 126 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 TLR5O60602 858 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 ITGB1P05556 798 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 PCDH1Q08174 1060 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 NFE2Q16621 373 aaPredicted RBP17.01■□□□□ 0.31
RAB40C-205ENST00000539661 CPSF6Q16630 551 aaKnown RBP eCLIP17.01■□□□□ 0.31
RAB40C-205ENST00000539661 TSTQ16762 297 aaKnown RBP17.01■□□□□ 0.31
RAB40C-205ENST00000539661 SMUG1Q53HV7 270 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 KIAA1841Q6NSI8 718 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 RBFAQ8N0V3 343 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 CSGALNACT1Q8TDX6 532 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 JPH3Q8WXH2 748 aaPredicted RBP17.01■□□□□ 0.31
RAB40C-205ENST00000539661 TTC9Q92623 222 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 TTYH2Q9BSA4 534 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 TAPBPLQ9BX59 468 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 FAM120CQ9NX05 1096 aaKnown RBP17.01■□□□□ 0.31
RAB40C-205ENST00000539661 SCAMP3O14828 347 aaKnown RBP17■□□□□ 0.31
RAB40C-205ENST00000539661 IL7P13232 177 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 IDH2P48735 452 aaKnown RBP17■□□□□ 0.31
RAB40C-205ENST00000539661 PPIGQ13427 754 aaKnown RBP eCLIP17■□□□□ 0.31
RAB40C-205ENST00000539661 HKDC1Q2TB90 917 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 TMPRSS11AQ6ZMR5 421 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 OR10G2Q8NGC3 310 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 DOHHQ9BU89 302 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 SLC22A4Q9H015 551 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 ELOVL6Q9H5J4 265 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 SERTM1A2A2V5 107 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 COL6A1P12109 1028 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 GPR15P49685 360 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 CRISP3P54108 245 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 ASAH1Q13510 395 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 GPAT3Q53EU6 434 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 SIGIRRQ6IA17 410 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 ZNF621Q6ZSS3 439 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 UTS2BQ765I0 119 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 ZBTB2Q8N680 514 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 B3GNT7Q8NFL0 401 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 FBXO32Q969P5 355 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 SPON2Q9BUD6 331 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 SLC32A1Q9H598 525 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 RPRD1BQ9NQG5 326 aaKnown RBP17■□□□□ 0.31
RAB40C-205ENST00000539661 IMPAD1Q9NX62 359 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 DUSP12Q9UNI6 340 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 CORO2BQ9UQ03 480 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 MPZL2O60487 215 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 SCN2BO60939 215 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 P2RX3P56373 397 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 CYP4F2P78329 520 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 SCN1BQ07699 218 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 SPRYD7Q5W111 196 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 LRRC66Q68CR7 880 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 LIX1LQ8IVB5 337 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 SLC5A8Q8N695 610 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 ASB15Q8WXK1 588 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 FCRL1Q96LA6 429 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 CCM2Q9BSQ5 444 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 TSEN34Q9BSV6 310 aaKnown RBP17■□□□□ 0.31
RAB40C-205ENST00000539661 RACGAP1Q9H0H5 632 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 ACOXLQ9NUZ1 547 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 MS4A12Q9NXJ0 267 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 ENOPH1Q9UHY7 261 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 MUTYHQ9UIF7 546 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 SNX7Q9UNH6 387 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 TMA7Q9Y2S6 64 aaKnown RBP17■□□□□ 0.31
RAB40C-205ENST00000539661 BOLA1Q9Y3E2 137 aa17■□□□□ 0.31
RAB40C-205ENST00000539661 LRATO95237 230 aa16.99■□□□□ 0.31
RAB40C-205ENST00000539661 SLC25A14O95258 325 aaPredicted RBP16.99■□□□□ 0.31
RAB40C-205ENST00000539661 MYCP01106 439 aaPredicted RBP16.99■□□□□ 0.31
RAB40C-205ENST00000539661 ANXA5P08758 320 aa16.99■□□□□ 0.31
RAB40C-205ENST00000539661 PPIBP23284 216 aaKnown RBP16.99■□□□□ 0.31
RAB40C-205ENST00000539661 MLLT3P42568 568 aaPredicted RBP16.99■□□□□ 0.31
RAB40C-205ENST00000539661 CDH4P55283 916 aa16.99■□□□□ 0.31
RAB40C-205ENST00000539661 MED22Q15528 200 aa16.99■□□□□ 0.31
RAB40C-205ENST00000539661 SERPINA9Q86WD7 417 aa16.99■□□□□ 0.31
RAB40C-205ENST00000539661 CFAP52Q8N1V2 620 aa16.99■□□□□ 0.31
RAB40C-205ENST00000539661 FAM181AQ8N9Y4 354 aa16.99■□□□□ 0.31
RAB40C-205ENST00000539661 KLHDC9Q8NEP7 349 aa16.99■□□□□ 0.31
RAB40C-205ENST00000539661 OR8J2Q8NGG1 315 aa16.99■□□□□ 0.31
RAB40C-205ENST00000539661 ZFYVE19Q96K21 471 aa16.99■□□□□ 0.31
RAB40C-205ENST00000539661 SRRQ9GZT4 340 aa16.99■□□□□ 0.31
RAB40C-205ENST00000539661 PLSCR3Q9NRY6 295 aa16.99■□□□□ 0.31
RAB40C-205ENST00000539661 PCDHB11Q9Y5F2 797 aa16.99■□□□□ 0.31
RAB40C-205ENST00000539661 CFAP20Q9Y6A4 193 aaKnown RBP16.99■□□□□ 0.31
RAB40C-205ENST00000539661 KCNE1BA0A087WTH5 132 aa16.99■□□□□ 0.31
RAB40C-205ENST00000539661 A8MV72 311 aaPredicted RBP16.99■□□□□ 0.31
RAB40C-205ENST00000539661 GPR39O43194 453 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms