RNA–Protein interactions for RNA: ENST00000534124.5

VPS51-214, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,089 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-214ENST00000534124 ST6GALNAC3Q8NDV1 305 aa20.28■□□□□ 0.84
VPS51-214ENST00000534124 LRRC39Q96DD0 335 aa20.28■□□□□ 0.84
VPS51-214ENST00000534124 RUNDC3BQ96NL0 473 aa20.28■□□□□ 0.84
VPS51-214ENST00000534124 TRMT1Q9NXH9 659 aaKnown RBP20.28■□□□□ 0.84
VPS51-214ENST00000534124 MKL2Q9ULH7 1088 aa20.28■□□□□ 0.84
VPS51-214ENST00000534124 MRPS2Q9Y399 296 aaKnown RBP20.28■□□□□ 0.84
VPS51-214ENST00000534124 NBPF19A0A087WUL8 3843 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 PABPN1LA6NDY0 278 aaKnown RBP20.27■□□□□ 0.84
VPS51-214ENST00000534124 KLHL18O94889 574 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 TSPAN12O95859 305 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 HIST1H2AGP0C0S8 130 aaPredicted RBP20.27■□□□□ 0.84
VPS51-214ENST00000534124 RNF224P0DH78 156 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 HIST1H2ADP20671 130 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 AP1S2P56377 157 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 IL2P60568 153 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 CSNK1G2P78368 415 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 PDAP1Q13442 181 aaKnown RBP20.27■□□□□ 0.84
VPS51-214ENST00000534124 SYT16Q17RD7 645 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 TMEM214Q6NUQ4 689 aaKnown RBP20.27■□□□□ 0.84
VPS51-214ENST00000534124 TMEM205Q6UW68 189 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 IGDCC3Q8IVU1 814 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 CAMKVQ8NCB2 501 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 OR9A4Q8NGU2 314 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 BRIX1Q8TDN6 353 aaKnown RBP20.27■□□□□ 0.84
VPS51-214ENST00000534124 HIST1H2AHQ96KK5 128 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 HIST1H2AJQ99878 128 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 HAUS8Q9BT25 410 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 H2AFJQ9BTM1 129 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 ZNF700Q9H0M5 742 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 ATG10Q9H0Y0 220 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 PPANQ9NQ55 473 aaKnown RBP20.27■□□□□ 0.84
VPS51-214ENST00000534124 ERRFI1Q9UJM3 462 aaPredicted RBP20.27■□□□□ 0.84
VPS51-214ENST00000534124 SH2B3Q9UQQ2 575 aa20.27■□□□□ 0.84
VPS51-214ENST00000534124 DIDO1Q9BTC0 2240 aaKnown RBP20.27■□□□□ 0.84
VPS51-214ENST00000534124 NOTCH2Q04721 2471 aa20.26■□□□□ 0.83
VPS51-214ENST00000534124 DYTNA2CJ06 578 aa20.26■□□□□ 0.83
VPS51-214ENST00000534124 BMP10O95393 424 aa20.26■□□□□ 0.83
VPS51-214ENST00000534124 C8orf89P0DMQ9 161 aa20.26■□□□□ 0.83
VPS51-214ENST00000534124 GRK3P35626 688 aa20.26■□□□□ 0.83
VPS51-214ENST00000534124 MAT1AQ00266 395 aaKnown RBP20.26■□□□□ 0.83
VPS51-214ENST00000534124 DR1Q01658 176 aa20.26■□□□□ 0.83
VPS51-214ENST00000534124 NAE1Q13564 534 aa20.26■□□□□ 0.83
VPS51-214ENST00000534124 TEDDM1Q5T9Z0 273 aa20.26■□□□□ 0.83
VPS51-214ENST00000534124 STEAP4Q687X5 459 aa20.26■□□□□ 0.83
VPS51-214ENST00000534124 FAAH2Q6GMR7 532 aa20.26■□□□□ 0.83
VPS51-214ENST00000534124 CAPN13Q6MZZ7 669 aaPredicted RBP20.26■□□□□ 0.83
VPS51-214ENST00000534124 GRHL3Q8TE85 626 aa20.26■□□□□ 0.83
VPS51-214ENST00000534124 PSMF1Q92530 271 aa20.26■□□□□ 0.83
VPS51-214ENST00000534124 TM4SF19Q96DZ7 209 aa20.26■□□□□ 0.83
VPS51-214ENST00000534124 PLAC1Q9HBJ0 212 aa20.26■□□□□ 0.83
VPS51-214ENST00000534124 PYCARDQ9ULZ3 195 aa20.26■□□□□ 0.83
VPS51-214ENST00000534124 SLC5A6Q9Y289 635 aa20.26■□□□□ 0.83
VPS51-214ENST00000534124 WIPF3A6NGB9 483 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 LDLRP01130 860 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 STATHP02808 62 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 SLC35G6P0C7Q6 338 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 CDH1P12830 882 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 ICAM2P13598 275 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 BCL6P41182 706 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 ELK3P41970 407 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 ARG2P78540 354 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 FRG1Q14331 258 aaKnown RBP20.25■□□□□ 0.83
VPS51-214ENST00000534124 PCOLCEQ15113 449 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 INAQ16352 499 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 DUPD1Q68J44 220 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 FAM45BPQ6NSW5 357 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 RPUSD3Q6P087 351 aaKnown RBP20.25■□□□□ 0.83
VPS51-214ENST00000534124 FAM180AQ6UWF9 173 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 ASPGQ86U10 573 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 GPATCH11Q8N954 259 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 FAM45AQ8TCE6 357 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 FAR1Q8WVX9 515 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 METTL21AQ8WXB1 218 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 CFAP36Q96G28 342 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 C5orf34Q96MH7 638 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 TUBB6Q9BUF5 446 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 VN1R1Q9GZP7 353 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 ARL15Q9NXU5 204 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 PTGFRNQ9P2B2 879 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 SLC17A6Q9P2U8 582 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 CHMP2BQ9UQN3 213 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 TEX264Q9Y6I9 313 aa20.25■□□□□ 0.83
VPS51-214ENST00000534124 E2F3O00716 465 aa20.24■□□□□ 0.83
VPS51-214ENST00000534124 UQCRHP07919 91 aa20.24■□□□□ 0.83
VPS51-214ENST00000534124 ENO2P09104 434 aaPredicted RBP20.24■□□□□ 0.83
VPS51-214ENST00000534124 EDN3P14138 238 aa20.24■□□□□ 0.83
VPS51-214ENST00000534124 IL1RNP18510 177 aa20.24■□□□□ 0.83
VPS51-214ENST00000534124 EFNA3P52797 238 aa20.24■□□□□ 0.83
VPS51-214ENST00000534124 SNRPNP63162 240 aaKnown RBP20.24■□□□□ 0.83
VPS51-214ENST00000534124 HECTD2Q5U5R9 776 aa20.24■□□□□ 0.83
VPS51-214ENST00000534124 HIBCHQ6NVY1 386 aaPredicted RBP20.24■□□□□ 0.83
VPS51-214ENST00000534124 PRSS41Q7RTY9 318 aa20.24■□□□□ 0.83
VPS51-214ENST00000534124 SIRT6Q8N6T7 355 aa20.24■□□□□ 0.83
VPS51-214ENST00000534124 ABHD11Q8NFV4 315 aa20.24■□□□□ 0.83
VPS51-214ENST00000534124 OR56A3Q8NH54 315 aa20.24■□□□□ 0.83
VPS51-214ENST00000534124 ATL1Q8WXF7 558 aa20.24■□□□□ 0.83
VPS51-214ENST00000534124 CAPZA3Q96KX2 299 aa20.24■□□□□ 0.83
VPS51-214ENST00000534124 WDR83Q9BRX9 315 aaKnown RBP20.24■□□□□ 0.83
VPS51-214ENST00000534124 SARGQ9BW04 601 aa20.24■□□□□ 0.83
VPS51-214ENST00000534124 TRIM54Q9BYV2 358 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms