RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 MYBPHQ13203 477 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 KRT33BQ14525 404 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 NFATC4Q14934 902 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 ASIC2Q16515 512 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 MEP1AQ16819 746 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 SETMARQ53H47 684 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 KRTCAP3Q53RY4 240 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 SEL1L2Q5TEA6 688 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZDHHC20Q5W0Z9 365 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 DHRS7BQ6IAN0 325 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 RWDD4Q6NW29 188 aaKnown RBP4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 IZUMO2Q6UXV1 221 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 C3orf62Q6ZUJ4 267 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 TUBA1AQ71U36 451 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 TRMT10CQ7L0Y3 403 aaKnown RBP4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 OTUD6AQ7L8S5 288 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 PEX26Q7Z412 305 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 HAUS6Q7Z4H7 955 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 CEP97Q8IW35 865 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 PI4KAP1Q8N8J0 262 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZNF114Q8NC26 417 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 HMGCLL1Q8TB92 370 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 UTP15Q8TED0 518 aaKnown RBP4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 TMED6Q8WW62 240 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 P2RX5Q93086 422 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 SLC35B4Q969S0 331 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 SCMH1Q96GD3 660 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 QRFPRQ96P65 431 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 DGAT2Q96PD7 388 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 DDX47Q9H0S4 455 aaKnown RBP4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 DPH5Q9H2P9 285 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 RAD21L1Q9H4I0 556 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 POLD4Q9HCU8 107 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 FAIMQ9NVQ4 179 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 DDX43Q9NXZ2 648 aaKnown RBP4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 SMARCAL1Q9NZC9 954 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 VPS54Q9P1Q0 977 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 EPS15L1Q9UBC2 864 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 AMACRQ9UHK6 382 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 HACL1Q9UJ83 578 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 WBP11Q9Y2W2 641 aaKnown RBP4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 AMDHD2Q9Y303 409 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 ATP6V0A2Q9Y487 856 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 PCDHGA5Q9Y5G8 931 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 TRPV2Q9Y5S1 764 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 LAMB2P55268 1798 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 DUOX1Q9NRD9 1551 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 TNRC6CQ9HCJ0 1690 aaKnown RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 MYH14Q7Z406 1995 aaKnown RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 A0A1B0GVG6 124 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 TMEM120BA0PK00 339 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZSCAN5CA6NGD5 496 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 MAGEB17A8MXT2 336 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 MID1O15344 667 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 GYG2O15488 501 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 NDUFS4O43181 175 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 CDH16O75309 829 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 KDM4BO94953 1096 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 UBTFL6P0CB48 400 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 VPREB1P12018 145 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 FCGR1AP12314 374 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 KRT13P13646 458 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZNF12P17014 697 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 S1PR1P21453 382 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 KCNA5P22460 613 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 NR2F2P24468 414 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 CCNE1P24864 410 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 CHRNA3P32297 505 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 SLC1A4P43007 532 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 RPL5P46777 297 aaKnown RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 CAPZA2P47755 286 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 DNA2P51530 1060 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 NUP107P57740 925 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 SEC61A1P61619 476 aaKnown RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 PPP2R2BQ00005 443 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 ITGA7Q13683 1181 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 KYNUQ16719 465 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 MTHFSDQ2M296 383 aaKnown RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 C9orf152Q5JTZ5 239 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZNF449Q6P9G9 518 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 RHBDF2Q6PJF5 856 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 PACS1Q6VY07 963 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 RGS9BPQ6ZS82 235 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 CENPUQ71F23 418 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 LDB1Q86U70 411 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 EXOC3L1Q86VI1 746 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 FOXP4Q8IVH2 680 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 PM20D2Q8IYS1 436 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZNF34Q8IZ26 560 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 ACVR1CQ8NER5 493 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 OR5R1Q8NH85 324 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 CKAP2Q8WWK9 683 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 TANKQ92844 425 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 DGCR14Q96DF8 476 aaKnown RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 ANKRD36BP1Q96IX9 119 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 CNDP2Q96KP4 475 aaKnown RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 TTC25Q96NG3 672 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 BIRC8Q96P09 236 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 BTBD9Q96Q07 612 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 CDRT15Q96T59 188 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms