RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 HOXA9P31269 272 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 OR1G1P47890 313 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 RPL7AP62424 266 aaKnown RBP4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 MBTD1Q05BQ5 628 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 NCBP1Q09161 790 aaKnown RBP4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 KIR2DS5Q14953 304 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 ZC2HC1CQ53FD0 456 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 ZNF805Q5CZA5 627 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 PPM1LQ5SGD2 360 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 NSUN5P2Q63ZY6 315 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 FAM53AQ6NSI3 398 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 Q75L30 129 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 ZNF410Q86VK4 478 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 CCDC60Q8IWA6 550 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 SPEM1Q8N4L4 309 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 GBGT1Q8N5D6 347 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 METTL6Q8TCB7 284 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 PIBF1Q8WXW3 757 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 FAM3CQ92520 227 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 ELSPBP1Q96BH3 223 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 FAM149B1Q96BN6 582 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 MSANTD3Q96H12 275 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 MBOAT7Q96N66 472 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 JPH2Q9BR39 696 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 RSPH9Q9H1X1 276 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 PIGMQ9H3S5 423 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 MAGIXQ9H6Y5 334 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 ZBTB20Q9HC78 741 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 TRPV5Q9NQA5 729 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 UTP6Q9NYH9 597 aaKnown RBP4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 GDE1Q9NZC3 331 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 PDP2Q9P2J9 529 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 UBA2Q9UBT2 640 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 DNAJB4Q9UDY4 337 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 NDRG2Q9UN36 371 aaKnown RBP4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 PCDHGA5Q9Y5G8 931 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 PCNX2A6NKB5 2137 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 GCN1Q92616 2671 aaKnown RBP4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 SMG1Q96Q15 3661 aaKnown RBP4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 NPIPB15A6NHN6 443 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 A6NLC8 198 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 DUXAA6NLW8 204 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 DDX39AO00148 427 aaKnown RBP4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 NR5A2O00482 541 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 SLC25A12O75746 678 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 DDHD2O94830 711 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 KRT19P08727 400 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 CD48P09326 243 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 CALM1P0DP23 149 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 CALM2P0DP24 149 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 CALM3P0DP25 149 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 VDRP11473 427 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 CEACAM1P13688 526 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 BDNFP23560 247 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 HOXA6P31267 233 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 ELF1P32519 619 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 NOVA1P51513 510 aaKnown RBP4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 POU5F1Q01860 360 aaKnown RBP4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 GABPB1Q06547 395 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 ITGB3BPQ13352 177 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 JAKMIP3Q5VZ66 844 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 CWC27Q6UX04 472 aaKnown RBP4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 CCDC73Q6ZRK6 1079 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 CATSPER4Q7RTX7 472 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 PM20D2Q8IYS1 436 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 HACE1Q8IYU2 909 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 RNF168Q8IYW5 571 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 EMC1Q8N766 993 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 PAF1Q8N7H5 531 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 FAM184AQ8NB25 1140 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 C1orf131Q8NDD1 294 aaKnown RBP4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 NCOA7Q8NI08 942 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 HCAR2Q8TDS4 363 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 CCDC47Q96A33 483 aaKnown RBP4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 RMDN2Q96LZ7 410 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 ZNF577Q9BSK1 485 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 ARRDC1-AS1Q9H2J1 176 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 ZFP14Q9HCL3 533 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 HEBP1Q9NRV9 189 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 DIAPH3Q9NSV4 1193 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 ACAD8Q9UKU7 415 aa4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 PIN4Q9Y237 131 aaKnown RBP4.42□□□□□ -1.7
HMGB3P5-201ENST00000428894 LOC400499M0QZD8 3231 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 UQCRHLA0A096LP55 91 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 BICDL2A1A5D9 508 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 ZNF197O14709 1029 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 CLIC2O15247 247 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 EXTL3O43909 919 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 TADA2AO75478 443 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 WISP2O76076 250 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 CCNE2O96020 404 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 UQCRHP07919 91 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 SPARCP09486 303 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 GNB3P16520 340 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 PSMC3P17980 439 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 CSRP1P21291 193 aaKnown RBP4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 MSNP26038 577 aaKnown RBP4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 SFNP31947 248 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 NR2C2P49116 596 aa4.41□□□□□ -1.7
HMGB3P5-201ENST00000428894 ZBED6P86452 979 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms