RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Rbm11Q80YT9 238 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Znf410Q8BKX7 478 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Chchd4Q8VEA4 139 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Mtif2Q91YJ5 727 aaKnown RBP14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 CrebzfQ91ZR3 358 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Clcc1Q99LI2 539 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Nudt7Q99P30 236 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Dph2Q9CR25 489 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Cyp2u1Q9CX98 530 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Atp5dQ9D3D9 168 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Slc19a2Q9EQN9 498 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Tgm1Q9JLF6 815 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Tagln3Q9R1Q8 199 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Frem2Q6NVD0 3160 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Cfap77A0A087WRI3 283 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 1600015I10RikE9Q745 711 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 FpgtG5E8F4 590 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 Foxq1O70220 400 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 F9P16294 471 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 Hspa1bP17879 642 aaKnown RBP14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 UrodP70697 367 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 OxtrP97926 388 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 Pnliprp1Q5BKQ4 473 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 Psd2Q6P1I6 770 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 Dennd5aQ6PAL8 1287 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 Rbbp8Q80YR6 893 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 GalpQ810H5 117 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 Panx3Q8CEG0 392 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 Atat1Q8K341 421 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 Adap2Q8R2V5 381 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 Abhd4Q8VD66 342 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 Olfr868Q8VFI8 309 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 Olfr853Q8VGG6 305 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 Kif19Q99PT9 997 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 Wars2Q9CYK1 360 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 Haus5Q9D786 619 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 Fer1l5P0DM40 2038 aa14.27□□□□□ -0.12
Nup88-202ENSMUST00000108530 CntrlA2AL36 2334 aa14.27□□□□□ -0.13
Nup88-202ENSMUST00000108530 Col9a3A2ACT7 680 aa14.27□□□□□ -0.13
Nup88-202ENSMUST00000108530 Rnf39A2RT81 352 aa14.27□□□□□ -0.13
Nup88-202ENSMUST00000108530 Otud3B1AZ99 396 aa14.27□□□□□ -0.13
Nup88-202ENSMUST00000108530 Vmn2r125D3Z3M1 369 aa14.27□□□□□ -0.13
Nup88-202ENSMUST00000108530 AladP10518 330 aa14.27□□□□□ -0.13
Nup88-202ENSMUST00000108530 Gal3st3P61315 431 aa14.27□□□□□ -0.13
Nup88-202ENSMUST00000108530 Kcnh6Q32ME0 950 aa14.27□□□□□ -0.13
Nup88-202ENSMUST00000108530 Rassf5Q5EBH1 413 aa14.27□□□□□ -0.13
Nup88-202ENSMUST00000108530 Megf11Q80T91 1091 aa14.27□□□□□ -0.13
Nup88-202ENSMUST00000108530 DglucyQ8BH86 617 aa14.27□□□□□ -0.13
Nup88-202ENSMUST00000108530 Rdh1Q8CGV4 317 aa14.27□□□□□ -0.13
Nup88-202ENSMUST00000108530 Asb9Q91ZT8 290 aa14.27□□□□□ -0.13
Nup88-202ENSMUST00000108530 Pop5Q9DB28 169 aa14.27□□□□□ -0.13
Nup88-202ENSMUST00000108530 Scnn1gQ9WU39 655 aa14.27□□□□□ -0.13
Nup88-202ENSMUST00000108530 Dyrk1bQ9Z188 629 aa14.27□□□□□ -0.13
Nup88-202ENSMUST00000108530 Plxnd1Q3UH93 1925 aa14.27□□□□□ -0.13
Nup88-202ENSMUST00000108530 Hcn3O88705 779 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 AprtP08030 180 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Tcea3P23881 347 aaKnown RBP14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Ppp3cbP48453 525 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Lzts1P60853 599 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Riiad1Q3KNY5 119 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Gngt2Q61017 69 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 VclQ64727 1066 aaKnown RBP14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Rasgrp3Q6NZH9 691 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Q6P1I3 445 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Olig3Q6PFG8 273 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 PrlhrQ6VMN6 370 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Ahcyl1Q80SW1 530 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Pp2d1Q8BVT6 620 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Bmt2Q8BXK4 403 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Pex19Q8VCI5 299 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Pcdhb21Q91V48 774 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Gemin6Q9CX53 166 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Clic3Q9D7P7 237 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Snap29Q9ERB0 260 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 NpvfQ9ESQ8 188 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Cts6Q9ET52 334 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Cd300ld2A2A7W0 305 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Tgm7A2ART8 616 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Saxo1B1AXP3 476 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Vmn1r88E9Q235 316 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Vmn1r238E9Q373 306 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Gm4775F7ANJ3 135 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Mbl1P39039 239 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 IduaP48441 634 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Dab1P97318 588 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Grin2cQ01098 1239 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Bcl2a1Q07440 172 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Gpr149Q3UVY1 732 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Sox17Q61473 419 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Tpgs2Q66JT5 296 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Slc36a3Q811P0 477 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Vps37aQ8CHS8 397 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Ints14Q8R3P6 515 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Ptov1Q91VU8 416 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 5330417H12RikQ9D3P2 110 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Wdr53Q9DB94 358 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Cyp4f14Q9EP75 524 aa14.26□□□□□ -0.13
Nup88-202ENSMUST00000108530 Zbed6D2EAC2 980 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Vsig10lD3YZF7 868 aa14.25□□□□□ -0.13
Nup88-202ENSMUST00000108530 Ifi213D3Z5G0 586 aa14.25□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms