RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 HPDLQ96IR7 371 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 SPATA17Q96L03 361 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 C7orf26Q96N11 449 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 PGLYRP2Q96PD5 576 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 TRMT61BQ9BVS5 477 aaKnown RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 C1QTNF5Q9BXJ0 243 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 PLA2G2FQ9BZM2 168 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 MTMR12Q9C0I1 747 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 BLZF1Q9H2G9 400 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 FAM124BQ9H5Z6 455 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 C8orf33Q9H7E9 229 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 PPP1R3EQ9H7J1 279 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 SCPEP1Q9HB40 452 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZNF334Q9HCZ1 680 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 LTB4R2Q9NPC1 389 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 EXOC1Q9NV70 894 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 DDX43Q9NXZ2 648 aaKnown RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 UXTQ9UBK9 157 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 MALT1Q9UDY8 824 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 CDH9Q9ULB4 789 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 TTC7AQ9ULT0 858 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 MYO15AQ9UKN7 3530 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 THADAQ6YHU6 1953 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 SAA2-SAA4A0A096LPE2 208 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 MYBPHLA2RUH7 354 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 LRRIQ3A6PVS8 624 aaPredicted RBP3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 HEPACAM2A8MVW5 462 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZNF263O14978 683 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 CLIC2O15247 247 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 MID1O15344 667 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 CALUO43852 315 aaPredicted RBP3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 PAGE4O60829 102 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 ASS1P00966 412 aaKnown RBP3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 NR3C1P04150 777 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 RPN1P04843 607 aaKnown RBP3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 CLEC3BP05452 202 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 SNRNP70P08621 437 aaKnown RBP3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 KRT19P08727 400 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 DLATP10515 647 aaKnown RBP3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 GJA1P17302 382 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 TNNI1P19237 187 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 GABRR2P28476 465 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 GAS1P54826 345 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 SEC61BP60468 96 aaKnown RBP3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 NOP14P78316 857 aaKnown RBP3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 OLR1P78380 273 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 RPL36AP83881 106 aaKnown RBP3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 BFSP1Q12934 665 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 ANGPT1Q15389 498 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 TEAD2Q15562 447 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 CTF1Q16619 201 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 SGSM1Q2NKQ1 1148 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 DPCR1Q3MIW9 517 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 SLC39A12Q504Y0 691 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZCWPW2Q504Y3 356 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 CXorf66Q5JRM2 361 aaPredicted RBP3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 SIGIRRQ6IA17 410 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 FAM122CQ6P4D5 195 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZNF852Q6ZMS4 543 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 PQLC2Q6ZP29 291 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 INTS8Q75QN2 995 aaKnown RBP3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 CPLX4Q7Z7G2 160 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 UNC93AQ86WB7 457 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 RALGPS2Q86X27 583 aaPredicted RBP3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 NELFCDQ8IXH7 590 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 CCDC13Q8IYE1 715 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 ADGRF2Q8IZF7 708 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 CMTM8Q8IZV2 173 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 CRYBG2Q8N1P7 616 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 MAGEC3Q8TD91 643 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 MRPS31Q92665 395 aaKnown RBP3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 SMARCE1Q969G3 411 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 FAM149B1Q96BN6 582 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 MMABQ96EY8 250 aaPredicted RBP3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 PERPQ96FX8 193 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 MPP4Q96JB8 637 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 PPP1R13BQ96KQ4 1090 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 TMEM68Q96MH6 324 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 TIGD1Q96MW7 591 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 GSDMAQ96QA5 445 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 FNBP1Q96RU3 617 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 SYT15Q9BQS2 421 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 PCDH9Q9HC56 1237 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 IL37Q9NZH6 218 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZNF224Q9NZL3 707 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 EHD2Q9NZN4 543 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 C1RLQ9NZP8 487 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 ABI3Q9P2A4 366 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZNF69Q9UC07 566 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 CNOT8Q9UFF9 292 aaKnown RBP3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 GTF3C4Q9UKN8 822 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 NME7Q9Y5B8 376 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 SDK1Q7Z5N4 2213 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 GPR179Q6PRD1 2367 aa3.53□□□□□ -1.84
CKS1BP3-201ENST00000600888 ABCA7Q8IZY2 2146 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 TNRC6BQ9UPQ9 1833 aaKnown RBP3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 CFAP54Q96N23 3096 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 FAM92AA1XBS5 289 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 GOLGA6L9A6NEM1 432 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 PRR23AA6NEV1 266 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms