RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 B4GAT1O43505 415 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 TSPAN6O43657 245 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 WDR47O94967 919 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 LDLRP01130 860 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 EBLN1P0CF75 366 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 EPORP19235 508 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 FSHRP23945 695 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 PRKG2Q13237 762 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 GBX1Q14549 363 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 IMPG1Q17R60 797 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 PTCHD3Q3KNS1 767 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 PAGE2BQ5JRK9 111 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 PLEKHS1Q5SXH7 462 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 RAVER1Q8IY67 606 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 OR7A2PQ8NGA2 310 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 BTN2A2Q8WVV5 523 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 ASZ1Q8WWH4 475 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 SNX18Q96RF0 628 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 NTMT1Q9BV86 223 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 MCOLN1Q9GZU1 580 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 ATG10Q9H0Y0 220 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 SLC32A1Q9H598 525 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 HEBP1Q9NRV9 189 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 EIF3LQ9Y262 564 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 CCL27Q9Y4X3 112 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 PCDHGA3Q9Y5H0 932 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 FAM234BA2RU67 622 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 RGS14O43566 566 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 IDH3BO43837 385 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 EEDO75530 441 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 CLDN9O95484 217 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 POU2F2P09086 479 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 ITPKAP23677 461 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 CASP3P42574 277 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 PLIN5Q00G26 463 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 ABRQ12979 859 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 PTGR1Q14914 329 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 R3HCC1LQ7Z5L2 792 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 BPHLQ86WA6 291 aaPredicted RBP16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 IFNEQ86WN2 208 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 LILRA3Q8N6C8 439 aaPredicted RBP16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 RASGEF1AQ8N9B8 481 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 RHOXF1Q8NHV9 184 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 SUN5Q8TC36 379 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 ATL1Q8WXF7 558 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 FOXJ1Q92949 421 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 GLYATL1Q969I3 302 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 ACTL8Q9H568 366 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 LEF1Q9UJU2 399 aaPredicted RBP16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 PRELID1Q9Y255 219 aa16.52■□□□□ 0.24
SHKBP1-205ENST00000594973 H0Y858 1186 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 M0R3G1 203 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 MANBAO00462 879 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 WNT9AO14904 365 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 KRT6AP02538 564 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 FTH1P02794 183 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 KRT6BP04259 564 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 CDH1P12830 882 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 OXTRP30559 389 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 PREPP48147 710 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 MRPL19P49406 292 aaKnown RBP16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 DGKQP52824 942 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 NKX2-5P52952 324 aaPredicted RBP16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 ERVK-21P61565 698 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 TOP3AQ13472 1001 aaPredicted RBP16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 GAB4Q2WGN9 574 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 SYTL3Q4VX76 610 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 COQ5Q5HYK3 327 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 ANGPTL6Q8NI99 470 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 TSPEARQ8WU66 669 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 PPP3R2Q96LZ3 170 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 SOX17Q9H6I2 414 aaPredicted RBP16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 INTS7Q9NVH2 962 aaKnown RBP16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 SLC22A14Q9Y267 594 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 MN1Q10571 1320 aaPredicted RBP16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 EYSQ5T1H1 3165 aa16.52■□□□□ 0.23
SHKBP1-205ENST00000594973 SAGE2PA6NJ88 616 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 SEC22BO75396 215 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 UPK1BO75841 260 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 NADKO95544 446 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 PRNPP04156 253 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 CYP2A7P20853 494 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 PBLDP30039 288 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 SHMT2P34897 504 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 COPZ1P61923 177 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 ZNF181Q2M3W8 571 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 WDR45BQ5MNZ6 344 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 C9orf64Q5T6V5 341 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 ZFAND4Q86XD8 727 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 RGL4Q8IZJ4 473 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 SPERTQ8NA61 448 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 MCOLN3Q8TDD5 553 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 TIFAQ96CG3 184 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 TMEM74Q96NL1 305 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 SFXN1Q9H9B4 322 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 RAD18Q9NS91 495 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 TRPS1Q9UHF7 1281 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 LOC105371267A0A1B0GV96 52 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 A6NL46 340 aa16.51■□□□□ 0.23
SHKBP1-205ENST00000594973 EVPLLA8MZ36 301 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms