RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ISCA2Q86U28 154 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 CENPLQ8N0S6 344 aaPredicted RBP15.01□□□□□ -0.01
USB1-208ENST00000563207 TCAIMQ8N3R3 496 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 OR8K5Q8NH50 307 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 ZNF480Q8WV37 535 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 FBXL8Q96CD0 374 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 TSNARE1Q96NA8 513 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 LRFN5Q96NI6 719 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 IL17FQ96PD4 163 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 NLNQ9BYT8 704 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 PCBD2Q9H0N5 130 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 VPS11Q9H270 941 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 IGSF5Q9NSI5 407 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 INTS7Q9NVH2 962 aaKnown RBP15.01□□□□□ -0.01
USB1-208ENST00000563207 EURLQ9NYK6 297 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 LUZP4Q9P127 313 aa15.01□□□□□ -0.01
USB1-208ENST00000563207 NBASA2RRP1 2371 aa15□□□□□ -0.01
USB1-208ENST00000563207 NPEPPSL1A6NEC2 478 aa15□□□□□ -0.01
USB1-208ENST00000563207 SYCE1LA8MT33 242 aa15□□□□□ -0.01
USB1-208ENST00000563207 E7ENX8 843 aa15□□□□□ -0.01
USB1-208ENST00000563207 CNOT3O75175 753 aaKnown RBP15□□□□□ -0.01
USB1-208ENST00000563207 CCNDBP1O95273 360 aa15□□□□□ -0.01
USB1-208ENST00000563207 IMPA1P29218 277 aa15□□□□□ -0.01
USB1-208ENST00000563207 UQCRFS1P47985 274 aa15□□□□□ -0.01
USB1-208ENST00000563207 TAP2Q03519 686 aa15□□□□□ -0.01
USB1-208ENST00000563207 RAPSNQ13702 412 aa15□□□□□ -0.01
USB1-208ENST00000563207 TGFBIQ15582 683 aa15□□□□□ -0.01
USB1-208ENST00000563207 BEND6Q5SZJ8 279 aaPredicted RBP15□□□□□ -0.01
USB1-208ENST00000563207 AGTRAPQ6RW13 159 aa15□□□□□ -0.01
USB1-208ENST00000563207 GPSM1Q86YR5 675 aa15□□□□□ -0.01
USB1-208ENST00000563207 IQCKQ8N0W5 287 aa15□□□□□ -0.01
USB1-208ENST00000563207 C19orf47Q8N9M1 422 aaKnown RBP15□□□□□ -0.01
USB1-208ENST00000563207 COL26A1Q96A83 441 aa15□□□□□ -0.01
USB1-208ENST00000563207 NXNL1Q96CM4 212 aa15□□□□□ -0.01
USB1-208ENST00000563207 CHRNA10Q9GZZ6 450 aa15□□□□□ -0.01
USB1-208ENST00000563207 FANCEQ9HB96 536 aa15□□□□□ -0.01
USB1-208ENST00000563207 MLXIPLQ9NP71 852 aa15□□□□□ -0.01
USB1-208ENST00000563207 ARGLU1Q9NWB6 273 aaPredicted RBP15□□□□□ -0.01
USB1-208ENST00000563207 STOX2Q9P2F5 926 aaPredicted RBP15□□□□□ -0.01
USB1-208ENST00000563207 TBK1Q9UHD2 729 aa15□□□□□ -0.01
USB1-208ENST00000563207 SERTAD3Q9UJW9 196 aa15□□□□□ -0.01
USB1-208ENST00000563207 IKZF3Q9UKT9 509 aa15□□□□□ -0.01
USB1-208ENST00000563207 RNF112Q9ULX5 631 aa15□□□□□ -0.01
USB1-208ENST00000563207 SNX7Q9UNH6 387 aa15□□□□□ -0.01
USB1-208ENST00000563207 DOPEY2Q9Y3R5 2298 aa15□□□□□ -0.01
USB1-208ENST00000563207 A0A0J9YY10 115 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 CLEC18AA5D8T8 446 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 E7EQ34 232 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 KERAO60938 352 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 KLF7O75840 302 aaPredicted RBP14.99□□□□□ -0.01
USB1-208ENST00000563207 GSTA1P08263 222 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 RBP1P09455 135 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 RAB40ALP0C0E4 278 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 MSL3P1P0C860 447 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 KRT15P19012 456 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 TFEBP19484 476 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 RPA3P35244 121 aaPredicted RBP14.99□□□□□ -0.01
USB1-208ENST00000563207 SLCO1A2P46721 670 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 DLG1Q12959 904 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 ATP1A4Q13733 1029 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 UBAP2LQ14157 1087 aaKnown RBP14.99□□□□□ -0.01
USB1-208ENST00000563207 SF1Q15637 639 aaKnown RBP14.99□□□□□ -0.01
USB1-208ENST00000563207 PRR30Q53SZ7 412 aaPredicted RBP14.99□□□□□ -0.01
USB1-208ENST00000563207 CLEC18BQ6UXF7 455 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 TAX1BP1Q86VP1 789 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 LRRC56Q8IYG6 542 aaPredicted RBP14.99□□□□□ -0.01
USB1-208ENST00000563207 SPATA6LQ8N4H0 392 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 CLEC18CQ8NCF0 446 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 FDCSPQ8NFU4 85 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 EPS8L3Q8TE67 593 aaKnown RBP14.99□□□□□ -0.01
USB1-208ENST00000563207 MZB1Q8WU39 189 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 KCTD4Q8WVF5 259 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 THAP4Q8WY91 577 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 ZUFSPQ96AP4 578 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 PTERQ96BW5 349 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 SLC25A23Q9BV35 468 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 NUDT9Q9BW91 350 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 MFRPQ9BY79 579 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 CCDC177Q9NQR7 707 aaPredicted RBP14.99□□□□□ -0.01
USB1-208ENST00000563207 ACSS2Q9NR19 701 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 DHCR7Q9UBM7 475 aaKnown RBP14.99□□□□□ -0.01
USB1-208ENST00000563207 LGALS13Q9UHV8 139 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 KLK4Q9Y5K2 254 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 PTPN13Q12923 2485 aa14.99□□□□□ -0.01
USB1-208ENST00000563207 HEATR5BQ9P2D3 2071 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 A0A1W2PPV9 198 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 TLDC2A0PJX2 215 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 TARM1B6A8C7 271 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 OR2B3O76000 313 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 IPO13O94829 963 aaKnown RBP14.98□□□□□ -0.01
USB1-208ENST00000563207 GUCA1CO95843 209 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 S100BP04271 92 aaPredicted RBP14.98□□□□□ -0.01
USB1-208ENST00000563207 PGDP52209 483 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 ABATP80404 500 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 IRF9Q00978 393 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 PRDX1Q06830 199 aaKnown RBP14.98□□□□□ -0.01
USB1-208ENST00000563207 FASTKQ14296 549 aaKnown RBP14.98□□□□□ -0.01
USB1-208ENST00000563207 NCF4Q15080 339 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 OR4D1Q15615 310 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 MLIPQ5VWP3 458 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms