RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 CLIP3Q96DZ5 547 aa11.42□□□□□ -0.58
RABGGTA-218ENST00000560777 LRFN5Q96NI6 719 aa11.42□□□□□ -0.58
RABGGTA-218ENST00000560777 SARGQ9BW04 601 aa11.42□□□□□ -0.58
RABGGTA-218ENST00000560777 CAPS2Q9BXY5 557 aa11.42□□□□□ -0.58
RABGGTA-218ENST00000560777 SPNS1Q9H2V7 528 aa11.42□□□□□ -0.58
RABGGTA-218ENST00000560777 MRPL46Q9H2W6 279 aaKnown RBP11.42□□□□□ -0.58
RABGGTA-218ENST00000560777 LHX9Q9NQ69 397 aa11.42□□□□□ -0.58
RABGGTA-218ENST00000560777 DNAJC11Q9NVH1 559 aa11.42□□□□□ -0.58
RABGGTA-218ENST00000560777 IRAK4Q9NWZ3 460 aa11.42□□□□□ -0.58
RABGGTA-218ENST00000560777 GPRC5BQ9NZH0 403 aa11.42□□□□□ -0.58
RABGGTA-218ENST00000560777 DCDC2Q9UHG0 476 aa11.42□□□□□ -0.58
RABGGTA-218ENST00000560777 LGALS13Q9UHV8 139 aa11.42□□□□□ -0.58
RABGGTA-218ENST00000560777 PADI1Q9ULC6 663 aa11.42□□□□□ -0.58
RABGGTA-218ENST00000560777 SEC16AO15027 2179 aa11.42□□□□□ -0.58
RABGGTA-218ENST00000560777 MDC1Q14676 2089 aaKnown RBP11.42□□□□□ -0.58
RABGGTA-218ENST00000560777 ANKRD11Q6UB99 2663 aaPredicted RBP11.42□□□□□ -0.58
RABGGTA-218ENST00000560777 LOC101059948A0A1B0GTJ6 334 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 HYKKA2RU49 373 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 LRRC14BA6NHZ5 514 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 K7EPI3 171 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 TK2O00142 265 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 MEN1O00255 615 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 ERLIN1O75477 346 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 HBQ1P09105 142 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 CCNYL3P0C7X3 344 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 C1GALT1C1LP0DN25 315 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 KRT4P19013 534 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 VARSP26640 1264 aaKnown RBP11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 BCL6P41182 706 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 STAT5AP42229 794 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 RPS15AP62244 130 aaKnown RBP11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 TLE3Q04726 772 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 SLC18A2Q05940 514 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 ZNF844Q08AG5 666 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 ABHD18Q0P651 414 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 GRM7Q14831 915 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 PCBP2Q15366 365 aaKnown RBP eCLIP11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 PDK4Q16654 411 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 HKDC1Q2TB90 917 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 PRTGQ2VWP7 1150 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 ZNF385CQ66K41 422 aaPredicted RBP11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 LCN10Q6JVE6 187 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 FAM199XQ6PEV8 388 aaPredicted RBP11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 LRRC69Q6ZNQ3 347 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 LRRC70Q7Z2Q7 622 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 VN1R4Q7Z5H5 301 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 TMPRSS11BQ86T26 416 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 DSELQ8IZU8 1212 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 IL22RA1Q8N6P7 574 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 MFSD9Q8NBP5 474 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 HNRNPLLQ8WVV9 542 aaKnown RBP11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 TM4SF19Q96DZ7 209 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 PHF21BQ96EK2 531 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 THAP11Q96EK4 314 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 NDC1Q9BTX1 674 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 SLC7A5P2Q9GIP4 190 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 PELI2Q9HAT8 420 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 OPTCQ9UBM4 332 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 DHCR7Q9UBM7 475 aaKnown RBP11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 PCDHGA4Q9Y5G9 962 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 ZZEF1O43149 2961 aa11.41□□□□□ -0.58
RABGGTA-218ENST00000560777 TRBC2A0A5B9 178 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 TERTO14746 1132 aaKnown RBP11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 CLGNO14967 610 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 P2RX6O15547 441 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 OR1F1O43749 312 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 SMIM24O75264 130 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 SIX3O95343 332 aaPredicted RBP11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 MED26O95402 600 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 KLK3P07288 261 aaPredicted RBP11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 ALAS2P22557 587 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 F8A1P23610 371 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 CRHR1P34998 444 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 GRK3P35626 688 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 CCT5P48643 541 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 ATP1A2P50993 1020 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 ARSFP54793 590 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 PCDH1Q08174 1060 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 FAM214AQ32MH5 1076 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 MANEAQ5SRI9 462 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 C1orf189Q5VU69 101 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 YOD1Q5VVQ6 348 aaPredicted RBP11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 ATG9BQ674R7 924 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 METTL2BQ6P1Q9 378 aaKnown RBP11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 TTLL10Q6ZVT0 673 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 VASH2Q86V25 355 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 TRABD2AQ86V40 505 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 C4orf33Q8N1A6 199 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 ARHGEF39Q8N4T4 335 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 TEX9Q8N6V9 391 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 CSNK1A1LQ8N752 337 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 PTGR2Q8N8N7 351 aaPredicted RBP11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 SNX31Q8N9S9 440 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 MR1Q95460 341 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 RERGQ96A58 199 aaPredicted RBP11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 WDR34Q96EX3 536 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 ZIM3Q96PE6 472 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 GBP5Q96PP8 586 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 CCNL2Q96S94 520 aaPredicted RBP11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 MACROD1Q9BQ69 325 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms