RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 KIF1AQ12756 1690 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 PXDNQ92626 1479 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 NID2Q14112 1375 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 A0A1W2PPQ1 181 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 PIPSLA2A3N6 862 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 ISPDA4D126 451 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 CENPXA8MT69 81 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 SMLR1H3BR10 107 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 NR5A2O00482 541 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 INSIG1O15503 277 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 DLX3O60479 287 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 SPAG7O75391 227 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 ERN1O75460 977 aaKnown RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 EIF3GO75821 320 aaKnown RBP eCLIP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 SRP72O76094 671 aaKnown RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 SHBGP04278 402 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 ERCC1P07992 297 aaPredicted RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 ANXA5P08758 320 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 GIMD1P0DJR0 217 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 COX4I1P13073 169 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 MYF5P13349 255 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 LCP1P13796 627 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 EPHA8P29322 1005 aaPredicted RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 CORO1AP31146 461 aaKnown RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 APOBEC3AP31941 199 aaPredicted RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 CASP3P42574 277 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 VEGFBP49765 207 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 FHITP49789 147 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 NDST1P52848 882 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 OR2B6P58173 313 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 NUTF2P61970 127 aaKnown RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 TNNC1P63316 161 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 NOMO3P69849 1222 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 TXNL4AP83876 142 aaKnown RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 FAAP100Q0VG06 881 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 TSPAN31Q12999 210 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 CBFBQ13951 182 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 PDK3Q15120 406 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 NOMO1Q15155 1222 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 ATP6AP1Q15904 470 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 SNAPC1Q16533 368 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 KHDC1Q4VXA5 237 aaKnown RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 PRAMEF19Q5SWL8 479 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 CELF3Q5SZQ8 465 aaKnown RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 ATPAF1Q5TC12 328 aaPredicted RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 ZBTB37Q5TC79 503 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 ANGEL2Q5VTE6 544 aaKnown RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 NADSYN1Q6IA69 706 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 SLC25A25Q6KCM7 469 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 LETMD1Q6P1Q0 360 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 DENND1BQ6P3S1 775 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 AMIGO1Q86WK6 493 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 TMEM17Q86X19 198 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 NANOGP1Q8N7R0 232 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 VGLL2Q8N8G2 317 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 WDSUB1Q8N9V3 476 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 AGBL3Q8NEM8 1001 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 TRMT10AQ8TBZ6 339 aaKnown RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 CPT1CQ8TCG5 803 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 PAQR8Q8TEZ7 354 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 CACNG8Q8WXS5 425 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 STMN2Q93045 179 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 CAVIN3Q969G5 261 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 IGSF21Q96ID5 467 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 MRGPRX4Q96LA9 322 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 GAL3ST4Q96RP7 486 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 CGRRF1Q99675 332 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 NAPGQ99747 312 aaPredicted RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 ZNF559Q9BR84 538 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 MND1Q9BWT6 205 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 POLR3FQ9H1D9 316 aaPredicted RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 TTYH1Q9H313 450 aaPredicted RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 C12orf65Q9H3J6 166 aaKnown RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 EBF3Q9H4W6 596 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 TMEM160Q9NX00 188 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 B3GNT2Q9NY97 397 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 ERAP1Q9NZ08 941 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 PPP4R1LQ9P1A2 415 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 KLQ9UEF7 1012 aa4.83□□□□□ -1.64
EPHA3-202ENST00000452448 APOBEC3BQ9UH17 382 aaKnown RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 GDF2Q9UK05 429 aaPredicted RBP4.83□□□□□ -1.64
EPHA3-202ENST00000452448 CASZ1Q86V15 1759 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 HEG1Q9ULI3 1381 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 PSME4Q14997 1843 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 A0A1W2PRB8 838 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 FAM234BA2RU67 622 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 PTGES3LE9PB15 166 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 TEX46H3BTG2 121 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 ABCD4O14678 606 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 PSMG1O95456 288 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 GOT2P00505 430 aaKnown RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 ZNF7P17097 686 aaPredicted RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 GIFP27352 417 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 GPR15P49685 360 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 NDUFV1P49821 464 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 IDH3AP50213 366 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 AP3S2P59780 193 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 RPL26P61254 145 aaKnown RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 ACSM1Q08AH1 577 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 SF3A3Q12874 501 aaKnown RBP eCLIP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms