RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 TRAFD1O14545 582 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 CAPN9O14815 690 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 ANKRD28O15084 1053 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 TTI1O43156 1089 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 CCDC22O60826 627 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 SPAG7O75391 227 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 SUPT3HO75486 399 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 SERPING1P05155 500 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 ATP5BP06576 529 aaKnown RBP4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 LYNP07948 512 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 ABCB1P08183 1280 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 HSPD1P10809 573 aaKnown RBP4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 ITGB8P26012 769 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 PTPN4P29074 926 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 HOXA11P31270 313 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 IFNAR2P48551 515 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 HSPA13P48723 471 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 TMED10P49755 219 aaKnown RBP4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 COG7P83436 770 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 DR1Q01658 176 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 ASPHQ12797 758 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 MED21Q13503 144 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 BTG3Q14201 252 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 KRT81Q14533 505 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 UAP1Q16222 522 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 SYT16Q17RD7 645 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 DNAL1Q4LDG9 190 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 IGSF11Q5DX21 431 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 RPUSD3Q6P087 351 aaKnown RBP4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 WDR59Q6PJI9 974 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 MIER3Q7Z3K6 550 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 GPR180Q86V85 440 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 LONP2Q86WA8 852 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 LRRC49Q8IUZ0 686 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 GCSAMQ8N6F7 178 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 IQCF1Q8N6M8 205 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 EMC1Q8N766 993 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 SLC38A9Q8NBW4 561 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 KCTD6Q8NC69 237 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 CATSPER1Q8NEC5 780 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 CCDC110Q8TBZ0 833 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 FNDC8Q8TC99 324 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 ELP5Q8TE02 316 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 DUSP19Q8WTR2 217 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 DDI1Q8WTU0 396 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 SCARB1Q8WTV0 552 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 SCFD1Q8WVM8 642 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 C3orf30Q96M34 536 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 SERPINB12Q96P63 405 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 CSF3RQ99062 836 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 PSMB7Q99436 277 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 DDOQ99489 341 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 SEMA3CQ99985 751 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 CCDC77Q9BR77 488 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 MRPS26Q9BYN8 205 aaKnown RBP4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 NACA2Q9H009 215 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 SPATC1LQ9H0A9 340 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 NT5C3AQ9H0P0 336 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 MMP27Q9H306 513 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 AZI2Q9H6S1 392 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 PALMDQ9NP74 551 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 FAM153AQ9UHL3 310 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 PADI3Q9ULW8 664 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 KLHL20Q9Y2M5 609 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 NFS1Q9Y697 457 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 FRMPD4Q14CM0 1322 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 MAP3K19Q56UN5 1328 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 ALS2Q96Q42 1657 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 IGLV5-37A0A075B6J1 123 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 HTR3EA5X5Y0 456 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 SMIM23A6NLE4 172 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 A8MUI8 341 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 PROB1E7EW31 1015 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 LAD1O00515 517 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 UBE2CO00762 179 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 RNF113AO15541 343 aaKnown RBP4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 PLPP2O43688 288 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 DKC1O60832 514 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 NOL3O60936 208 aaKnown RBP4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 FKBP6O75344 327 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZNF217O75362 1048 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 PALMO75781 387 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 TNFAIP8O95379 198 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 PSMG1O95456 288 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 CLDN14O95500 239 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 GGPS1O95749 300 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 GNA14O95837 355 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 AFPP02771 609 aaKnown RBP4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 MYBL1P10243 752 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 IFNAR1P17181 557 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 HRH2P25021 359 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 LONP1P36776 959 aaKnown RBP4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 CLDN20P56880 219 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 LINC00205P59089 165 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 PTENP60484 403 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 TUBA1BP68363 451 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 SIRPAP78324 504 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 CAV1Q03135 178 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 LRRC63Q05C16 580 aa4.27□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZNF155Q12901 538 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms