RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 LRCH3Q96II8 777 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 BTBD1Q9H0C5 482 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 XPNPEP1Q9NQW7 623 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 PCDHGB2Q9Y5G2 931 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 PENKP01210 267 aaPredicted RBP16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 EBLN1P0CF75 366 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 RPP38P78345 283 aaKnown RBP16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 SP140Q13342 867 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 SEC23BQ15437 767 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 NPY5RQ15761 445 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 MSS51Q4VC12 460 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 ARL9Q6T311 187 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 ZNF527Q8NB42 609 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 CCDC54Q8NEL0 328 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 NUS1Q96E22 293 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 HIST1H2AAQ96QV6 131 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 MKS1Q9NXB0 559 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 XPNPEP2O43895 674 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 PSMA6P60900 246 aaKnown RBP16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 ZNF33AQ06730 810 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 CCDC28AQ8IWP9 274 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 CDKN2AIPNLQ96HQ2 116 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 ADAD1Q96M93 576 aaKnown RBP16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 ALPK1Q96QP1 1244 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 ZCCHC3Q9NUD5 404 aaKnown RBP16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 A0A1W2PPW3 197 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 DISC1C4P0D8 188 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 FKBP1BP68106 108 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 ST3GAL3Q11203 375 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 SLC13A2Q13183 592 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 RHEBQ15382 184 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 ZNF423Q2M1K9 1284 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 VARS2Q5ST30 1063 aaKnown RBP16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 ZNF678Q5SXM1 525 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 LRRC69Q6ZNQ3 347 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 RBM12BQ8IXT5 1001 aaKnown RBP16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 MGAT4BQ9UQ53 548 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 CMPK2Q5EBM0 449 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 MEDAGQ5VYS4 303 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 PLPP4Q5VZY2 271 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 GAL3ST4Q96RP7 486 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 CCM2Q9BSQ5 444 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 WACQ9BTA9 647 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 LIN28AQ9H9Z2 209 aaKnown RBP16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 DUS2Q9NX74 493 aaKnown RBP16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 RDH8Q9NYR8 311 aa16.65■□□□□ 0.26
SNAPC3-202ENST00000380821 TYROBPO43914 113 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 AHCYP23526 432 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 ILF3Q12906 894 aaKnown RBP eCLIP16.64■□□□□ 0.251e-13■■■■■ 45.5
SNAPC3-202ENST00000380821 SNAP47Q5SQN1 464 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 C2CD4AQ8NCU7 369 aaPredicted RBP16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 GABBR2O75899 941 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 PVALBP20472 110 aaPredicted RBP16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 CSKP41240 450 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 NUDT6P53370 316 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 PTGR1Q14914 329 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 ALG1LQ6GMV1 187 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 LBX2Q6XYB7 198 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 YIPF7Q8N8F6 280 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 GNPDA2Q8TDQ7 276 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 C7orf43Q8WVR3 580 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 THRSPQ92748 146 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 PKP4Q99569 1192 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 ZNF471Q9BX82 626 aaPredicted RBP16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 BCO2Q9BYV7 579 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 OR2B2Q9GZK3 357 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 ZNF487B1APH4 448 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 EOMESO95936 686 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 OPN1SWP03999 348 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 ALAS2P22557 587 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 TM4SF1P30408 202 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 ARSFP54793 590 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 CASP9P55211 416 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 XKR5Q6UX68 686 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 C1orf52Q8N6N3 182 aaKnown RBP16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 OR8J3Q8NGG0 315 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 OR14C36Q8NHC7 312 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 NEUROD4Q9HD90 331 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 ENAMQ9NRM1 1142 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 A0A1B0GVC2 190 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 G6PDP11413 515 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 MASP1P48740 699 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 SCGB2B2Q4G0G5 96 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 PRAMEF14Q5SWL7 426 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 PRAMEF13Q5VWM6 474 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 SPATA9Q9BWV2 254 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 ZNF696Q9H7X3 374 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 SIRPGQ9P1W8 387 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 CPQQ9Y646 472 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 SPEF2Q9C093 1822 aa16.64■□□□□ 0.25
SNAPC3-202ENST00000380821 LRRN3E7EW58 273 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 RP2O75695 350 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 FGF3P11487 239 aaPredicted RBP16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 ENTPD1P49961 510 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 GAD2Q05329 585 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 TRAM1Q15629 374 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 THOC6Q86W42 341 aaKnown RBP16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 NPAS4Q8IUM7 802 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 PHC2Q8IXK0 858 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 SLC44A3Q8N4M1 653 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms