RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 INPPL1O15357 1258 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 ZNF763Q0D2J5 394 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 UBAP2Q5T6F2 1119 aaKnown RBP16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 SMARCD3Q6STE5 483 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 CYB5D2Q8WUJ1 264 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 SLC5A11Q8WWX8 675 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 PCDHB3Q9Y5E6 796 aa16.6■□□□□ 0.25
TRAPPC11-201ENST00000334690 MAGEB3O15480 346 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 SLC6A4P31645 630 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 PTGR1Q14914 329 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 TICAM1Q8IUC6 712 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 DCUN1D3Q8IWE4 304 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 IGSF21Q96ID5 467 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 KCTD7Q96MP8 289 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 KCNS3Q9BQ31 491 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 PAK6Q9NQU5 681 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 DNAJC25-GNG10A0A024R161 153 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 OR1I1O60431 355 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 CHRM5P08912 532 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 FDXRP22570 491 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 BLKP51451 505 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 SMSP52788 366 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 TPTEP56180 551 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 TAS2R50P59544 299 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 NOXRED1Q6NXP6 359 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 BLOC1S3Q6QNY0 202 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 SYVN1Q86TM6 617 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 OTUB2Q96DC9 234 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 UCK2Q9BZX2 261 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 FARSBQ9NSD9 589 aaKnown RBP16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 PCDHGB7Q9Y5F8 929 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 PRRC2BQ5JSZ5 2229 aaKnown RBP16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 A0A1W2PPW3 197 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 AKAP8O43823 692 aaKnown RBP16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 DNAJB5O75953 348 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 CLPXO76031 633 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 BCHEP06276 602 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 ACRP10323 421 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 AKT2P31751 481 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 AVPR1BP47901 424 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 KCNC4Q03721 635 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 MEP1AQ16819 746 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 CMPK2Q5EBM0 449 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 LIPJQ5W064 366 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 PRR11Q96HE9 360 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 OR51B5Q9H339 312 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 HCN4Q9Y3Q4 1203 aa16.59■□□□□ 0.25
TRAPPC11-201ENST00000334690 A0A096LPI6 279 aa16.58■□□□□ 0.25
TRAPPC11-201ENST00000334690 OAZ2O95190 189 aa16.58■□□□□ 0.25
TRAPPC11-201ENST00000334690 BDKRB1P46663 353 aa16.58■□□□□ 0.25
TRAPPC11-201ENST00000334690 ARSDP51689 593 aa16.58■□□□□ 0.25
TRAPPC11-201ENST00000334690 KCNAB2Q13303 367 aa16.58■□□□□ 0.25
TRAPPC11-201ENST00000334690 CYBRD1Q53TN4 286 aa16.58■□□□□ 0.25
TRAPPC11-201ENST00000334690 TUBA3EQ6PEY2 450 aa16.58■□□□□ 0.25
TRAPPC11-201ENST00000334690 OR9A1PQ8NGU1 263 aa16.58■□□□□ 0.25
TRAPPC11-201ENST00000334690 CDADC1Q9BWV3 514 aa16.58■□□□□ 0.25
TRAPPC11-201ENST00000334690 GJB5O95377 273 aa16.58■□□□□ 0.25
TRAPPC11-201ENST00000334690 PRKACGP22612 351 aa16.58■□□□□ 0.25
TRAPPC11-201ENST00000334690 RPS13P62277 151 aaKnown RBP16.58■□□□□ 0.25
TRAPPC11-201ENST00000334690 PPP2R2BQ00005 443 aa16.58■□□□□ 0.25
TRAPPC11-201ENST00000334690 LDLRAD1Q5T700 205 aa16.58■□□□□ 0.25
TRAPPC11-201ENST00000334690 CARS2Q9HA77 564 aaKnown RBP16.58■□□□□ 0.25
TRAPPC11-201ENST00000334690 OARD1Q9Y530 152 aa16.58■□□□□ 0.25
TRAPPC11-201ENST00000334690 UBXN7O94888 489 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 DIRAS1O95057 198 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 NANOGNBQ7Z5D8 188 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 ZFAND4Q86XD8 727 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 NFKBIDQ8NI38 313 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 KLK6Q92876 244 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 RIPOR3Q96MK2 946 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 ELAC1Q9H777 363 aaKnown RBP16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 ANKHQ9HCJ1 492 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 DNAJC15Q9Y5T4 150 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 A0A1W2PQ45 241 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 A0A1W2PQY0 241 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 SLC16A5O15375 505 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 IFNA6P05013 189 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 HMGCLP35914 325 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 NUDT6P53370 316 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 LY6G5CQ5SRR4 150 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 FAAH2Q6GMR7 532 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 TP53INP2Q8IXH6 220 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 KLHL36Q8N4N3 616 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 ZNF366Q8N895 744 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 KDM1BQ8NB78 822 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 MUS81Q96NY9 551 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 GPR62Q9BZJ7 368 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 COMMD3Q9UBI1 195 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 DLGAP4Q9Y2H0 992 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 MYH7BA7E2Y1 1941 aa16.58■□□□□ 0.24
TRAPPC11-201ENST00000334690 CLIC3O95833 236 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 HSD3B1P14060 373 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 HSD3B2P26439 372 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 SLC13A2Q13183 592 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 DHRS4Q9BTZ2 278 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 PCDHGB1Q9Y5G3 927 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 WNT6Q9Y6F9 365 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 AGRPO00253 132 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 EEDO75530 441 aaKnown RBP16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 SERPINA3P01011 423 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms