RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 PRR23BQ6ZRT6 265 aa17.45■□□□□ 0.38
VIM-201ENST00000224237 NRROSQ86YC3 692 aa17.45■□□□□ 0.38
VIM-201ENST00000224237 RNF148Q8N7C7 305 aa17.45■□□□□ 0.38
VIM-201ENST00000224237 GPBAR1Q8TDU6 330 aa17.45■□□□□ 0.38
VIM-201ENST00000224237 CXorf40BQ96DE9 158 aa17.45■□□□□ 0.38
VIM-201ENST00000224237 KLHDC7BQ96G42 594 aa17.45■□□□□ 0.38
VIM-201ENST00000224237 SLC6A18Q96N87 628 aa17.45■□□□□ 0.38
VIM-201ENST00000224237 GSDMCQ9BYG8 508 aa17.45■□□□□ 0.38
VIM-201ENST00000224237 CUEDC1Q9NWM3 386 aaPredicted RBP17.45■□□□□ 0.38
VIM-201ENST00000224237 ZNF624Q9P2J8 865 aaPredicted RBP17.45■□□□□ 0.38
VIM-201ENST00000224237 SUCOQ9UBS9 1254 aaKnown RBP17.45■□□□□ 0.38
VIM-201ENST00000224237 BCAP29Q9UHQ4 241 aa17.45■□□□□ 0.38
VIM-201ENST00000224237 PRAMEF33A0A0G2JMD5 474 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 METTL12A8MUP2 240 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 H0Y3Z8 333 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 PRMT3O60678 531 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 XRCC1P18887 633 aaPredicted RBP17.44■□□□□ 0.38
VIM-201ENST00000224237 TACR1P25103 407 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 CD27P26842 260 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 SHMT2P34897 504 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 BLKP51451 505 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 DGKQP52824 942 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 YBX1P67809 324 aaKnown RBP17.44■□□□□ 0.38
VIM-201ENST00000224237 REEP5Q00765 189 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 EIF2B5Q13144 721 aaKnown RBP17.44■□□□□ 0.38
VIM-201ENST00000224237 FZD2Q14332 565 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 SPANXN4Q5MJ08 99 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 SLC2A7Q6PXP3 512 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 PARGQ86W56 976 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 DCP2Q8IU60 420 aaKnown RBP17.44■□□□□ 0.38
VIM-201ENST00000224237 SYT12Q8IV01 421 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 C1orf52Q8N6N3 182 aaKnown RBP17.44■□□□□ 0.38
VIM-201ENST00000224237 ZNF740Q8NDX6 193 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 OR4K1Q8NGD4 311 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 OR2A1Q8NGT9 310 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 CHTF18Q8WVB6 975 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 TESCQ96BS2 214 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 ASB9Q96DX5 294 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 EBPLQ9BY08 206 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 OR6C2Q9NZP2 312 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 SIT1Q9Y3P8 196 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 L3MBTL1Q9Y468 752 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 KNL1Q8NG31 2342 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 FANCMQ8IYD8 2048 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 C15orf38-AP3S2A0A0A6YYH1 394 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 FKBP6O75344 327 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 KRT36O76013 467 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 PRPS1L1P21108 318 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 SLC6A2P23975 617 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 SERPINB1P30740 379 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 FLOT2Q14254 428 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 RBBP5Q15291 538 aaKnown RBP17.44■□□□□ 0.38
VIM-201ENST00000224237 DPY19L1Q2PZI1 675 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 SPATS1Q496A3 300 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 ARPINQ7Z6K5 226 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 DHDDSQ86SQ9 333 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 SPACA7Q96KW9 195 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 RHBGQ9H310 441 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 NT5DC2Q9H857 520 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 SIRT5Q9NXA8 310 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 CD300AQ9UGN4 299 aa17.44■□□□□ 0.38
VIM-201ENST00000224237 PRORSD1PA6NEY8 169 aa17.43■□□□□ 0.38
VIM-201ENST00000224237 H7BY64 318 aa17.43■□□□□ 0.38
VIM-201ENST00000224237 PDGFBP01127 241 aaPredicted RBP17.43■□□□□ 0.38
VIM-201ENST00000224237 TIA1P31483 386 aaKnown RBP eCLIP17.43■□□□□ 0.381e-19■■■■□ 20.4
VIM-201ENST00000224237 SLC19A1P41440 591 aa17.43■□□□□ 0.38
VIM-201ENST00000224237 ABATP80404 500 aa17.43■□□□□ 0.38
VIM-201ENST00000224237 CCNIQ14094 377 aa17.43■□□□□ 0.38
VIM-201ENST00000224237 CAPRIN1Q14444 709 aaKnown RBP17.43■□□□□ 0.38
VIM-201ENST00000224237 RCN1Q15293 331 aa17.43■□□□□ 0.38
VIM-201ENST00000224237 MAPKAPK3Q16644 382 aa17.43■□□□□ 0.38
VIM-201ENST00000224237 GALNT18Q6P9A2 607 aa17.43■□□□□ 0.38
VIM-201ENST00000224237 AMIGO1Q86WK6 493 aa17.43■□□□□ 0.38
VIM-201ENST00000224237 RIMKLAQ8IXN7 391 aa17.43■□□□□ 0.38
VIM-201ENST00000224237 LCN9Q8WX39 176 aa17.43■□□□□ 0.38
VIM-201ENST00000224237 STARD8Q92502 1023 aa17.43■□□□□ 0.38
VIM-201ENST00000224237 TMEM74Q96NL1 305 aa17.43■□□□□ 0.38
VIM-201ENST00000224237 PRAP1Q96NZ9 151 aa17.43■□□□□ 0.38
VIM-201ENST00000224237 IER2Q9BTL4 223 aa17.43■□□□□ 0.38
VIM-201ENST00000224237 TCEAL2Q9H3H9 227 aaPredicted RBP17.43■□□□□ 0.38
VIM-201ENST00000224237 NKX1-2Q9UD57 310 aaPredicted RBP17.43■□□□□ 0.38
VIM-201ENST00000224237 MAPRE3Q9UPY8 281 aa17.43■□□□□ 0.38
VIM-201ENST00000224237 ANKDD1BA6NHY2 528 aa17.42■□□□□ 0.38
VIM-201ENST00000224237 PRICKLE3O43900 615 aaPredicted RBP17.42■□□□□ 0.38
VIM-201ENST00000224237 SH3BGRLO75368 114 aa17.42■□□□□ 0.38
VIM-201ENST00000224237 KCNH1O95259 989 aa17.42■□□□□ 0.38
VIM-201ENST00000224237 CCNDBP1O95273 360 aa17.42■□□□□ 0.38
VIM-201ENST00000224237 TGFB1P01137 390 aa17.42■□□□□ 0.38
VIM-201ENST00000224237 TCN1P20061 433 aaPredicted RBP17.42■□□□□ 0.38
VIM-201ENST00000224237 PTX3P26022 381 aaPredicted RBP17.42■□□□□ 0.38
VIM-201ENST00000224237 ASMTP46597 345 aa17.42■□□□□ 0.38
VIM-201ENST00000224237 C21orf58P58505 322 aa17.42■□□□□ 0.38
VIM-201ENST00000224237 AP2B1P63010 937 aa17.42■□□□□ 0.38
VIM-201ENST00000224237 RAE1P78406 368 aaKnown RBP17.42■□□□□ 0.38
VIM-201ENST00000224237 RPL6Q02878 288 aaKnown RBP17.42■□□□□ 0.38
VIM-201ENST00000224237 TRIM25Q14258 630 aaKnown RBP17.42■□□□□ 0.38
VIM-201ENST00000224237 ZNF542PQ5EBM4 170 aa17.42■□□□□ 0.38
VIM-201ENST00000224237 AAGABQ6PD74 315 aa17.42■□□□□ 0.38
VIM-201ENST00000224237 SLC15A3Q8IY34 581 aa17.42■□□□□ 0.38
VIM-201ENST00000224237 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.42■□□□□ 0.386e-7■■■■■ 139.2
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms