RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 TMEM202A6NGA9 273 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 SNPHO15079 494 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 INPP4BO15327 924 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 HIST1H2AGP0C0S8 130 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 HIST1H2ADP20671 130 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 ELK4P28324 431 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 NR4A2P43354 598 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 NFYCQ13952 458 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 PAGE3Q5JUK9 113 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 ERAP2Q6P179 960 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 DPPA4Q7L190 304 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 GET4Q7L5D6 327 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 SPPL2CQ8IUH8 684 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 TBC1D21Q8IYX1 336 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 Q8N9G6 341 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 MAGEE2Q8TD90 523 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 PHF10Q8WUB8 498 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 ASB11Q8WXH4 323 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 FGF13Q92913 245 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 TP53INP1Q96A56 240 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 HIST1H2AHQ96KK5 128 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 HIST1H2AJQ99878 128 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 H2AFJQ9BTM1 129 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 ZSCAN5AQ9BUG6 496 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 ZDHHC4Q9NPG8 344 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 SLAMF8Q9P0V8 285 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 KLHL42Q9P2K6 505 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 SATB2Q9UPW6 733 aa16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 TMA7Q9Y2S6 64 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-205ENST00000594973 PABPN1LA6NDY0 278 aaKnown RBP16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 ULK1O75385 1050 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 SLC2A4P14672 509 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 HTR1BP28222 390 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 GRK3P35626 688 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 MMP12P39900 470 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 PPP5CP53041 499 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 RPL38P63173 70 aaKnown RBP16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 CPSF6Q16630 551 aaKnown RBP eCLIP16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 HIST2H2ACQ16777 129 aaPredicted RBP16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 ZXDCQ2QGD7 858 aaPredicted RBP16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 PLA2G4EQ3MJ16 856 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 CLIP4Q8N3C7 705 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 TRAM1L1Q8N609 369 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 VN1R2Q8NFZ6 395 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 WFIKKN2Q8TEU8 576 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 UBTD2Q8WUN7 234 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 AP2M1Q96CW1 435 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 ASB16Q96NS5 453 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 P2RY13Q9BPV8 354 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 SLC12A9Q9BXP2 914 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 TRIM54Q9BYV2 358 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 ING2Q9H160 280 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 TRIT1Q9H3H1 467 aaKnown RBP16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 ACTR8Q9H981 624 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 NECTIN3Q9NQS3 549 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 DEC1Q9P2X7 70 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 ZNF490Q9ULM2 529 aaPredicted RBP16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 PLK4O00444 970 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 SGTAO43765 313 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 ALX3O95076 343 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 UMPSP11172 480 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 ITIH1P19827 911 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 SLC6A2P23975 617 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 CD40LGP29965 261 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 SOX11P35716 441 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 PBX2P40425 430 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 DCDC1P59894 354 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 GRIK2Q13002 908 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 PDE12Q6L8Q7 609 aaKnown RBP16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 LIPIQ6XZB0 460 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 SNX29P2Q8IUI4 249 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 ETFBKMTQ8IXQ9 262 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 SDR16C5Q8N3Y7 309 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 RASSF5Q8WWW0 418 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 LRIG1Q96JA1 1093 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 MUS81Q96NY9 551 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 IGFLR1Q9H665 355 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 CMTM6Q9NX76 183 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 EGFL7Q9UHF1 273 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 BAG5Q9UL15 447 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 UGT2A1Q9Y4X1 527 aa16.54■□□□□ 0.24
SHKBP1-205ENST00000594973 TPST1O60507 370 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 GABARAPO95166 117 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 NFATC1O95644 943 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 C8GP07360 202 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 CTSCP53634 463 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 EMX2Q04743 252 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 RABL3Q5HYI8 236 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 CYP20A1Q6UW02 462 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 THAP5Q7Z6K1 395 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 TECPR1Q7Z6L1 1165 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 MINDY1Q8N5J2 469 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 SMARCD2Q92925 531 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 ANKHQ9HCJ1 492 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 ZFP14Q9HCL3 533 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 ZIM2Q9NZV7 527 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 SLC27A6Q9Y2P4 619 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 YBX2Q9Y2T7 364 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 ANTXRLA6NF34 631 aa16.53■□□□□ 0.24
SHKBP1-205ENST00000594973 HEPACAM2A8MVW5 462 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms