RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 CYLC2Q14093 348 aaPredicted RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 TRIM29Q14134 588 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 KIAA0040Q15053 153 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 SLC22A6Q4U2R8 563 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 ZNF658BQ4V348 819 aaPredicted RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 SYT14P1Q58G82 188 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 GKAP1Q5VSY0 366 aaPredicted RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 ZNF776Q68DI1 518 aaPredicted RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 JADE1Q6IE81 842 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 CGB2Q6NT52 195 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 CFAP77Q6ZQR2 320 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 TMPRSS11FQ6ZWK6 438 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 R3HCC1LQ7Z5L2 792 aaKnown RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 MKXQ8IYA7 352 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 LGI2Q8N0V4 545 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 LYPD1Q8N2G4 141 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 RNF175Q8N4F7 328 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 NKAPQ8N5F7 415 aaKnown RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 ZNF525Q8N782 197 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 OR2L5Q8NG80 312 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 ETNPPLQ8TBG4 499 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 METTL6Q8TCB7 284 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 PHF10Q8WUB8 498 aaKnown RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 KCNE4Q8WWG9 221 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 ST8SIA4Q92187 359 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 HTRA1Q92743 480 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 ELSPBP1Q96BH3 223 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 FAM122AQ96E09 287 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 SGF29Q96ES7 293 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 THOC1Q96FV9 657 aaKnown RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 C1orf74Q96LT6 269 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 FAM20AQ96MK3 541 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 NEK1Q96PY6 1258 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 STRADBQ9C0K7 418 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 PAIP1Q9H074 479 aaKnown RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 PPIL3Q9H2H8 161 aaKnown RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 PLK3Q9H4B4 646 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 TLE6Q9H808 572 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 IL1RAPQ9NPH3 570 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP0.46□□□□□ -2.34
COPB1-212ENST00000534771 GKN1Q9NS71 199 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 DIAPH3Q9NSV4 1193 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 LARSQ9P2J5 1176 aaKnown RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 RSPH14Q9UHP6 348 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 ELF5Q9UKW6 265 aaPredicted RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 ARHGAP26Q9UNA1 814 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 ABCG2Q9UNQ0 655 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 CHKBQ9Y259 395 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 GPR52Q9Y2T5 361 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 MRPS18CQ9Y3D5 142 aaKnown RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 ZNF175Q9Y473 711 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 MTF2Q9Y483 593 aaPredicted RBP0.46□□□□□ -2.34
COPB1-212ENST00000534771 KCNE2Q9Y6J6 123 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 CDC42BPBQ9Y5S2 1711 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 PTCH1Q13635 1447 aa0.46□□□□□ -2.34
COPB1-212ENST00000534771 ARID1AO14497 2285 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 RUSC2Q8N2Y8 1516 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 IGLV3-16A0A075B6K0 115 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 IGKV2-28A0A075B6P5 120 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 A0A1W2PPH5 198 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 C17orf51A8MQB3 221 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 RNF103O00237 685 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 O00370 1275 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 PDXKO00764 312 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 ARPC2O15144 300 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 ECE2O60344 883 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 PRAMEF11O60813 436 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 ZNF253O75346 499 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 SEMA4FO95754 770 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 IGKV2D-28P01615 120 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 PIGRP01833 764 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 ATP1B1P05026 303 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 OR2T7P0C7T2 308 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 PRLRP16471 622 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 SELEP16581 610 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 XBP1P17861 261 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 SLC1A4P43007 532 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 TRAPPC10P48553 1259 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 CAMPP49913 170 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 STX17P56962 302 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 PRAMEP78395 509 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 ITPK1Q13572 414 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 EBI3Q14213 229 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 CA9Q16790 459 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 PHKG1Q16816 387 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 GSG1Q2KHT4 349 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 UGT3A2Q3SY77 523 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 SARM1Q6SZW1 724 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 LDHAL6AQ6ZMR3 332 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 ZNF600Q6ZNG1 722 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 KRTAP13-1Q8IUC0 172 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 CCDC146Q8IYE0 955 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 TEX11Q8IYF3 940 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 UBQLNLQ8IYU4 475 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 SLC22A15Q8IZD6 547 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 NDUFAF2Q8N183 169 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 NME8Q8N427 588 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 SAMD3Q8N6K7 520 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 TCEANCQ8N8B7 351 aa0.45□□□□□ -2.34
COPB1-212ENST00000534771 THAP8Q8NA92 274 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms