RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 CIDEAO60543 219 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 NOL3O60936 208 aaKnown RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 FKBP6O75344 327 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 OR7A10O76100 309 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 PIGNO95427 931 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 PSMG1O95456 288 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 OAS1P00973 400 aaKnown RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 PGK2P07205 417 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 ASNSP08243 561 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 WEE2P0C1S8 567 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 RFPL3SP0C7P2 107 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZCCHC18P0CG32 403 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 DBTP11182 482 aaKnown RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 AKR1B1P15121 316 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 VEGFAP15692 232 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 CHN1P15882 459 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 HOXD9P28356 352 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 CDC25AP30304 524 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 ARL1P40616 181 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 HTR2BP41595 481 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 MAPK9P45984 424 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 HCAR3P49019 387 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 ESRRGP62508 458 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 LRRC63Q05C16 580 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 GRAPQ13588 217 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 KRR1Q13601 381 aaKnown RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 CUL2Q13617 745 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 SELPLGQ14242 412 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 FLOT2Q14254 428 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 MORF4L2Q15014 288 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 AANATQ16613 207 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 TIGD6Q17RP2 521 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 USP41Q3LFD5 358 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 MDH1BQ5I0G3 518 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 TANGO2Q6ICL3 276 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 DGAT2L7PQ6IED9 249 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 JMJD6Q6NYC1 403 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 C3orf33Q6P1S2 294 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 DCLRE1AQ6PJP8 1040 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 ANKS1BQ7Z6G8 1248 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 GLRX5Q86SX6 157 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 SATL1Q86VE3 508 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 HORMAD1Q86X24 394 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 TDRPQ86YL5 185 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 KLBQ86Z14 1044 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 EPHX4Q8IUS5 362 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 SLC22A9Q8IVM8 553 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 MICU2Q8IYU8 434 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 DCP1BQ8IZD4 617 aaKnown RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 FSIP1Q8NA03 581 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 TTC29Q8NA56 475 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 DENND6BQ8NEG7 585 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 GRAPLQ8TC17 118 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 METTL6Q8TCB7 284 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 HEXDCQ8WVB3 486 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 TRAPPC12Q8WVT3 735 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 PDXPQ96GD0 296 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 TMEM80Q96HE8 168 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 NUDT16L1Q9BRJ7 211 aaKnown RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZSCAN5AQ9BUG6 496 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 GATA5Q9BWX5 397 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 MROQ9BYG7 248 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 GPR61Q9BZJ8 451 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 DCLK3Q9C098 648 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 PAIP1Q9H074 479 aaKnown RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 MAGEH1Q9H213 219 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 FOXP1Q9H334 677 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 GHITMQ9H3K2 345 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 SYNDIG1Q9H7V2 258 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZNF696Q9H7X3 374 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 ERVMER34-1Q9H9K5 563 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 SAR1AQ9NR31 198 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 OLFML3Q9NRN5 406 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 GLRX2Q9NS18 164 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 ECHDC1Q9NTX5 307 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 GDAP2Q9NXN4 497 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 OR6C2Q9NZP2 312 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 NPAP1Q9NZP6 1156 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 DBNLQ9UJU6 430 aaKnown RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 CDH7Q9ULB5 785 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 DIMT1Q9UNQ2 313 aaKnown RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZNF831Q5JPB2 1677 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 LRRC37A3O60309 1634 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 CACNA1FO60840 1977 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 GLI3P10071 1580 aa4.53□□□□□ -1.69
HMGB3P13-201ENST00000511263 CARMIL3Q8ND23 1372 aa4.53□□□□□ -1.69
HMGB3P13-201ENST00000511263 A0A1W2PQ72 361 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 FAM90A18PA6NE21 464 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 FAM90A16PA6NEW6 464 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 FAM90A9PA6NNJ1 464 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 A8MUI8 341 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 FAM90A5PA8MXJ8 464 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 F8W036 122 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 H0YJX3 145 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 hCG_2039718K7EN88 272 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 RHODO00212 210 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 AP3D1O14617 1153 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 MSI1O43347 362 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms