RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 FAM60AQ9NP50 221 aa14.34□□□□□ -0.11
CDC42SE1-203ENST00000470278 FGF21Q9NSA1 209 aa14.34□□□□□ -0.11
CDC42SE1-203ENST00000470278 GPRC5BQ9NZH0 403 aa14.34□□□□□ -0.11
CDC42SE1-203ENST00000470278 TMEM216Q9P0N5 145 aa14.34□□□□□ -0.11
CDC42SE1-203ENST00000470278 ACSL6Q9UKU0 697 aa14.34□□□□□ -0.11
CDC42SE1-203ENST00000470278 SNX7Q9UNH6 387 aa14.34□□□□□ -0.11
CDC42SE1-203ENST00000470278 SLC22A14Q9Y267 594 aa14.34□□□□□ -0.11
CDC42SE1-203ENST00000470278 TNPO3Q9Y5L0 923 aaKnown RBP14.34□□□□□ -0.11
CDC42SE1-203ENST00000470278 KCNE2Q9Y6J6 123 aa14.34□□□□□ -0.11
CDC42SE1-203ENST00000470278 COPEO14579 308 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 POLR1CO15160 346 aaPredicted RBP14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 NVLO15381 856 aaKnown RBP14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 BRINP1O60477 761 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 SMIM24O75264 130 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 WDR47O94967 919 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 TNFSF15O95150 251 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 RBMS1P29558 406 aaKnown RBP14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 HSPA7P48741 367 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 ERVPABLB-1P60509 514 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 CDC16Q13042 620 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 KCNAB1Q14722 419 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 PCBP2Q15366 365 aaKnown RBP eCLIP14.33□□□□□ -0.127e-7■■■■■ 29.1
CDC42SE1-203ENST00000470278 PFKFB4Q16877 469 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 C18orf21Q32NC0 220 aaPredicted RBP14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 CCDC153Q494R4 210 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 ZC3H12BQ5HYM0 836 aaKnown RBP14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 DCAF12Q5T6F0 453 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 TMEM164Q5U3C3 297 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 CEACAM20Q6UY09 585 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 SRRM1Q8IYB3 904 aaKnown RBP14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 C4orf33Q8N1A6 199 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 DNAJC22Q8N4W6 341 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 BANPQ8N9N5 519 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 SLC5A11Q8WWX8 675 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 NEIL2Q969S2 332 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 ZNF285Q96NJ3 590 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 FCRL4Q96PJ5 515 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 CAPS2Q9BXY5 557 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 KLHL25Q9H0H3 589 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 EHD1Q9H4M9 534 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 VIPAS39Q9H9C1 493 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 TMEM184CQ9NVA4 438 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 CUEDC1Q9NWM3 386 aaPredicted RBP14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 SLC39A1Q9NY26 324 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 CPSF2Q9P2I0 782 aaKnown RBP14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 PILRAQ9UKJ1 303 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 EMCNQ9ULC0 261 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 GRID1Q9ULK0 1009 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 SH2B3Q9UQQ2 575 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 KLHL20Q9Y2M5 609 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 ACTL7BQ9Y614 415 aa14.33□□□□□ -0.12
CDC42SE1-203ENST00000470278 AHCTF1Q8WYP5 2266 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 TLN1Q9Y490 2541 aaKnown RBP14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 C9orf172C9J069 976 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 H3BMH7 237 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 K7EPI3 171 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 PRAMEF10O60809 474 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 CTSVO60911 334 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 PROCP04070 461 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 MYZAPP0CAP1 466 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 GNAZP19086 355 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 GDF5P43026 501 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 MAPK10P53779 464 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 FOXM1Q08050 763 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 PCDH1Q08174 1060 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 E2F2Q14209 437 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 PDK4Q16654 411 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 PPP1R3BQ86XI6 285 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 PTGR2Q8N8N7 351 aaPredicted RBP14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 OR4K1Q8NGD4 311 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 RDH11Q8TC12 318 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 PMEPA1Q969W9 287 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 ZNF578Q96N58 590 aaPredicted RBP14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 SMC6Q96SB8 1091 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 RUFY1Q96T51 708 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 ZFYVE21Q9BQ24 234 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 SARGQ9BW04 601 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 C1QTNF3Q9BXJ4 246 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 STMN4Q9H169 189 aaPredicted RBP14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 PELI2Q9HAT8 420 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 APMAPQ9HDC9 416 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 SSU72Q9NP77 194 aaKnown RBP14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 THSD1Q9NS62 852 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 ABCF3Q9NUQ8 709 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 DNAJC11Q9NVH1 559 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 OPTCQ9UBM4 332 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 RARRES3Q9UL19 164 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 PLCL2Q9UPR0 1127 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 DYRK1BQ9Y463 629 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 ASB1Q9Y576 335 aa14.32□□□□□ -0.12
CDC42SE1-203ENST00000470278 KCNE1BA0A087WTH5 132 aa14.31□□□□□ -0.12
CDC42SE1-203ENST00000470278 GOLGA6L10A6NI86 522 aa14.31□□□□□ -0.12
CDC42SE1-203ENST00000470278 A8MT66 165 aa14.31□□□□□ -0.12
CDC42SE1-203ENST00000470278 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.31□□□□□ -0.12
CDC42SE1-203ENST00000470278 H7BY64 318 aa14.31□□□□□ -0.12
CDC42SE1-203ENST00000470278 NRP2O60462 931 aa14.31□□□□□ -0.12
CDC42SE1-203ENST00000470278 PLIN3O60664 434 aa14.31□□□□□ -0.12
CDC42SE1-203ENST00000470278 SRPX2O60687 465 aaPredicted RBP14.31□□□□□ -0.12
CDC42SE1-203ENST00000470278 CDH1P12830 882 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms