RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 AMER3Q8N944 861 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 HMGCLL1Q8TB92 370 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 ZNF354BQ96LW1 612 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 GPR137Q96N19 417 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 DRC3Q9H069 523 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 KCNK13Q9HB14 408 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 NPIPA1Q9UND3 350 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 MEMO1Q9Y316 297 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 KLK4Q9Y5K2 254 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 DCHS2Q6V1P9 2916 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 A0A1W2PQ72 361 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 NDUFS3O75489 264 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 EEF1DP29692 281 aaKnown RBP17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 CYLC1P35663 651 aaPredicted RBP17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 GRIA1P42261 906 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 TTPAP49638 278 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 EMP3P54852 163 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 MINDY4Q4G0A6 757 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 KRTCAP3Q53RY4 240 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 TMEM205Q6UW68 189 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 ALG3Q92685 438 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 IMMP1LQ96LU5 166 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 PLCD4Q9BRC7 762 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 HES7Q9BYE0 225 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 TGIF2Q9GZN2 237 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 ETNK1Q9HBU6 452 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 UTP6Q9NYH9 597 aaKnown RBP17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 SPATA7Q9P0W8 599 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 NEU2Q9Y3R4 380 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 CPAMD8Q8IZJ3 1885 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 PKDREJQ9NTG1 2253 aa17.07■□□□□ 0.32
CHCHD3-203ENST00000448878 A0A0U1RQJ8 604 aa17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 CD3EAPO15446 510 aaKnown RBP17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 ZNHIT1O43257 154 aa17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 AVPR1BP47901 424 aa17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 EIF3BP55884 814 aaKnown RBP17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 OC90Q02509 493 aaPredicted RBP17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 ACER2Q5QJU3 275 aa17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 GARNL3Q5VVW2 1013 aa17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 C3P1Q6ZMU1 363 aa17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 MEX3BQ6ZN04 569 aaKnown RBP17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 CPEB2Q7Z5Q1 589 aaKnown RBP17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 ZC3H7AQ8IWR0 971 aaKnown RBP17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 PPHLN1Q8NEY8 458 aaKnown RBP17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 THAP3Q8WTV1 239 aaPredicted RBP17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 CA5BP1Q8WTZ4 195 aa17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 FAM136AQ96C01 138 aa17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 C14orf79Q96F83 325 aa17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 SIGLEC12Q96PQ1 595 aa17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 UTP23Q9BRU9 249 aaKnown RBP17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 MARCH4Q9P2E8 410 aaPredicted RBP17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 TAC3Q9UHF0 121 aa17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 PCYOX1Q9UHG3 505 aa17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 TCAF1Q9Y4C2 921 aa17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 DUSP10Q9Y6W6 482 aa17.06■□□□□ 0.32
CHCHD3-203ENST00000448878 TACC2O95359 2948 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 ERI2A8K979 691 aaKnown RBP17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 FOXS1O43638 330 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 IFNB1P01574 187 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 STATHP02808 62 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 PKMP14618 531 aaKnown RBP17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 CD46P15529 392 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 ACVR1Q04771 509 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 TUBA3CQ13748 450 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 TESK1Q15569 626 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 NDUFA9Q16795 377 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 ANKRD20A4Q4UJ75 823 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 SPINK14Q6IE38 97 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 TUBA3EQ6PEY2 450 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 SPNS3Q6ZMD2 512 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 LANCL3Q6ZV70 420 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 CCDC170Q8IYT3 715 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 FAM98AQ8NCA5 519 aaKnown RBP17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 OR9A1PQ8NGU1 263 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 SMPDL3AQ92484 453 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 CYTH2Q99418 400 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 MCCC2Q9HCC0 563 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 CHRAC1Q9NRG0 131 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 C19orf25Q9UFG5 118 aaPredicted RBP17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 RIMKLBQ9ULI2 386 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 ZNF835Q9Y2P0 537 aa17.05■□□□□ 0.32
CHCHD3-203ENST00000448878 HIVEP1P15822 2718 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 TXNDC9O14530 226 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 PHF2O75151 1096 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 FDFT1P37268 417 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 CD96P40200 585 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 CSNK1G2P78368 415 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 OR1C1Q15619 314 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 MEP1AQ16819 746 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 Q6ZPB1 254 aaPredicted RBP17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 PAQR7Q86WK9 346 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 UBL4BQ8N7F7 174 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 TMEM178AQ8NBL3 297 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 AGAP11Q8TF27 550 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 SDCCAG3Q96C92 435 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 CALR3Q96L12 384 aaKnown RBP17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 OR2A5Q96R48 311 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 SPOCK3Q9BQ16 436 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 VN1R1Q9GZP7 353 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 P2RY12Q9H244 342 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms