RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 MSANTD3Q96H12 275 aa6.09□□□□□ -1.43
PUM1-207ENST00000440538 ZCCHC2Q9C0B9 1178 aaKnown RBP6.09□□□□□ -1.43
PUM1-207ENST00000440538 EFCAB1Q9HAE3 211 aa6.09□□□□□ -1.43
PUM1-207ENST00000440538 NMRAL1Q9HBL8 299 aa6.09□□□□□ -1.43
PUM1-207ENST00000440538 POLE4Q9NR33 117 aa6.09□□□□□ -1.43
PUM1-207ENST00000440538 FZD4Q9ULV1 537 aa6.09□□□□□ -1.43
PUM1-207ENST00000440538 PRPF19Q9UMS4 504 aaKnown RBP6.09□□□□□ -1.43
PUM1-207ENST00000440538 ARHGEF17Q96PE2 2063 aaPredicted RBP6.09□□□□□ -1.44
PUM1-207ENST00000440538 IFRD1O00458 451 aaPredicted RBP6.08□□□□□ -1.44
PUM1-207ENST00000440538 DLGAP1O14490 977 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 TPD52L2O43399 206 aaKnown RBP6.08□□□□□ -1.44
PUM1-207ENST00000440538 CRCPO75575 148 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 GNSP15586 552 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 PRDX6P30041 224 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 HMOX2P30519 316 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 LEPRP48357 1165 aaKnown RBP6.08□□□□□ -1.44
PUM1-207ENST00000440538 HSPA7P48741 367 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 RGS4P49798 205 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 RPL14P50914 215 aaKnown RBP6.08□□□□□ -1.44
PUM1-207ENST00000440538 NKX2-5P52952 324 aaPredicted RBP6.08□□□□□ -1.44
PUM1-207ENST00000440538 MAZP56270 477 aaKnown RBP6.08□□□□□ -1.44
PUM1-207ENST00000440538 CLDN6P56747 220 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 MEF2AQ02078 507 aaPredicted RBP6.08□□□□□ -1.44
PUM1-207ENST00000440538 FAM83EQ2M2I3 478 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 GPR33Q49SQ1 333 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 AGKQ53H12 422 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 NHSL2Q5HYW2 709 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 FAM45BPQ6NSW5 357 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 ZFP1Q6P2D0 407 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 KCTD8Q6ZWB6 473 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 PLD3Q8IV08 490 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 LSMEM2Q8N112 164 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 CAMKK1Q8N5S9 505 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 PSD4Q8NDX1 1056 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 CATSPER1Q8NEC5 780 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 BPIFB6Q8NFQ5 453 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 CDC26Q8NHZ8 85 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 FAM45AQ8TCE6 357 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 CXorf40BQ96DE9 158 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 LYSMD1Q96S90 227 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 STN1Q9H668 368 aaKnown RBP6.08□□□□□ -1.44
PUM1-207ENST00000440538 SIAEQ9HAT2 523 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 PNPLA3Q9NST1 481 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 WWOXQ9NZC7 414 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 SPATA7Q9P0W8 599 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 USP36Q9P275 1121 aaKnown RBP6.08□□□□□ -1.44
PUM1-207ENST00000440538 SCML1Q9UN30 329 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 SEC16AO15027 2179 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 GSAPA4D1B5 854 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 TLR4O00206 839 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 TRIM38O00635 465 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 FFAR3O14843 346 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 HDAC3O15379 428 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 GPR42O15529 346 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 ESR1P03372 595 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 CEACAM5P06731 702 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 HIST1H2AGP0C0S8 130 aaPredicted RBP6.08□□□□□ -1.44
PUM1-207ENST00000440538 HIST1H2ADP20671 130 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 ATP6V1B2P21281 511 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 CDH3P22223 829 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 OXTRP30559 389 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 ESRRGP62508 458 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 CAPRIN1Q14444 709 aaKnown RBP6.08□□□□□ -1.44
PUM1-207ENST00000440538 OR4D1Q15615 310 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 ALG11Q2TAA5 492 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 PGS1Q32NB8 556 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 ZBED5Q49AG3 693 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 CCDC92Q53HC0 331 aaPredicted RBP6.08□□□□□ -1.44
PUM1-207ENST00000440538 WDR45BQ5MNZ6 344 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 CERS6Q6ZMG9 384 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 NANOGNBQ7Z5D8 188 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 CROCCP3Q8IVE0 287 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 ZNF687Q8N1G0 1237 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 KIAA1958Q8N8K9 716 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 PTGR2Q8N8N7 351 aaPredicted RBP6.08□□□□□ -1.44
PUM1-207ENST00000440538 CD200R1Q8TD46 325 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 ASZ1Q8WWH4 475 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 HPS1Q92902 700 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 PTERQ96BW5 349 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 HIST1H2AHQ96KK5 128 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 HIST1H2AJQ99878 128 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 CCM2Q9BSQ5 444 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 H2AFJQ9BTM1 129 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 GAREM1Q9H706 876 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 ZBTB26Q9HCK0 441 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 RXFP3Q9NSD7 469 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 TBCCD1Q9NVR7 557 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 TBC1D29Q9UFV1 150 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 CDYLQ9Y232 598 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 OTOGLQ3ZCN5 2332 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 CNTRLQ7Z7A1 2325 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 RNF103-CHMP3A0A140T963 221 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 PPP6CO00743 305 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 CBFA2T3O75081 653 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 SP9P0CG40 484 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 MYCLP1P12525 358 aaPredicted RBP6.08□□□□□ -1.44
PUM1-207ENST00000440538 ELK4P28324 431 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 DNASE1L3Q13609 305 aa6.08□□□□□ -1.44
PUM1-207ENST00000440538 TRIM25Q14258 630 aaKnown RBP6.08□□□□□ -1.44
PUM1-207ENST00000440538 RBBP7Q16576 425 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms