RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 ZSWIM9Q86XI8 627 aa12.42□□□□□ -0.42
HERC3-203ENST00000407637 IFNL1Q8IU54 200 aa12.42□□□□□ -0.42
HERC3-203ENST00000407637 OR6P1Q8NGX9 317 aa12.42□□□□□ -0.42
HERC3-203ENST00000407637 RTP3Q9BQQ7 232 aa12.42□□□□□ -0.42
HERC3-203ENST00000407637 HEBP1Q9NRV9 189 aa12.42□□□□□ -0.42
HERC3-203ENST00000407637 C1orf109Q9NX04 203 aa12.42□□□□□ -0.42
HERC3-203ENST00000407637 OR4F21O95013 312 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 HOXB3P14651 431 aaPredicted RBP12.41□□□□□ -0.42
HERC3-203ENST00000407637 MAN2A2P49641 1150 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 VLDLRP98155 873 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 PTGR1Q14914 329 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 GPR68Q15743 365 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 FAM174BQ3ZCQ3 159 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 KLHL12Q53G59 568 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 CLLU1Q5K131 121 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 CEP76Q8TAP6 659 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 GPR152Q8TDT2 470 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 B3GALT6Q96L58 329 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 SLC6A17Q9H1V8 727 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 IL20Q9NYY1 176 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 MAPRE3Q9UPY8 281 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 TSC2P49815 1807 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 FAM240BA0A1B0GVZ2 78 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 PER2O15055 1255 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 MAFO75444 373 aaPredicted RBP12.41□□□□□ -0.42
HERC3-203ENST00000407637 S1PR4O95977 384 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 RPS17P08708 135 aaKnown RBP12.41□□□□□ -0.42
HERC3-203ENST00000407637 SOX3P41225 446 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 CLDN20P56880 219 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 TIAL1Q01085 375 aaKnown RBP eCLIP12.41□□□□□ -0.42
HERC3-203ENST00000407637 IKZF1Q13422 519 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 CDH18Q13634 790 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 DMC1Q14565 340 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 KIAA0040Q15053 153 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 NR6A1Q15406 480 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 MAPKAPK3Q16644 382 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 SP8Q8IXZ3 490 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 ATP6V1C2Q8NEY4 427 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 OR6C4Q8NGE1 309 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 OR6B3Q8NGW1 331 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 BCL7CQ8WUZ0 217 aaPredicted RBP12.41□□□□□ -0.42
HERC3-203ENST00000407637 FAM120BQ96EK7 910 aaKnown RBP12.41□□□□□ -0.42
HERC3-203ENST00000407637 ZBED6CLQ96FA7 236 aaPredicted RBP12.41□□□□□ -0.42
HERC3-203ENST00000407637 PRMT6Q96LA8 375 aaPredicted RBP12.41□□□□□ -0.42
HERC3-203ENST00000407637 SAV1Q9H4B6 383 aaPredicted RBP12.41□□□□□ -0.42
HERC3-203ENST00000407637 MINDY3Q9H8M7 445 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 RNF146Q9NTX7 359 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 THUMPD1Q9NXG2 353 aaKnown RBP12.41□□□□□ -0.42
HERC3-203ENST00000407637 RDH8Q9NYR8 311 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 RNF112Q9ULX5 631 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 LOC102723532A0A0G2JNH3 316 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 A0A1W2PQL4 384 aaPredicted RBP12.41□□□□□ -0.42
HERC3-203ENST00000407637 FAM220BPB1ANY3 271 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 PPEF2O14830 753 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 PROM1O43490 865 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 ANXA9O76027 345 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 CYP17A1P05093 508 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 FDXRP22570 491 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 ADRA1AP35348 466 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 ADRA1BP35368 520 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 SCNN1AP37088 669 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 ERVK-21P61565 698 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 INO80DQ53TQ3 878 aaPredicted RBP12.41□□□□□ -0.42
HERC3-203ENST00000407637 XRRA1Q6P2D8 792 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 FAHD1Q6P587 224 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 TRILQ7L0X0 811 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 VTCN1Q7Z7D3 282 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 UFD1Q92890 307 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 PTP4A1Q93096 173 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 CRELD1Q96HD1 420 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 NPY6RQ99463 290 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 PRKD2Q9BZL6 878 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 RBFOX1Q9NWB1 397 aaKnown RBP12.41□□□□□ -0.42
HERC3-203ENST00000407637 SRRDQ9UH36 339 aa12.41□□□□□ -0.42
HERC3-203ENST00000407637 PCNTO95613 3336 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 EVPLQ92817 2033 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 DOCK1Q14185 1865 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 SSC5DA1L4H1 1573 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 SMIM30A4D0T7 59 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 SOWAHBA6NEL2 793 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 E9PQ18 207 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 CACNG3O60359 315 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 PTP4A3O75365 173 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 PAHP00439 452 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 NPR1P16066 1061 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 GGT2P36268 569 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 ARSDP51689 593 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 RBP5P82980 135 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 RUNDC3AQ59EK9 446 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 SPANXN4Q5MJ08 99 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 TRIQKQ629K1 86 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 OR4F3Q6IEY1 312 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 HFE2Q6ZVN8 426 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 ZNF605Q86T29 641 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 DENND1CQ8IV53 801 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 KLHDC8BQ8IXV7 354 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 B3GNT7Q8NFL0 401 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 OR11H4Q8NGC9 324 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 TBC1D20Q96BZ9 403 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 TNIP3Q96KP6 325 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms