RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 COQ5Q5HYK3 327 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 PAGE3Q5JUK9 113 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 NET1Q7Z628 596 aaPredicted RBP20.41■□□□□ 0.86
VRK2-201ENST00000340157 KRTCAP2Q8N6L1 136 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 CLHC1Q8NHS4 586 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 GPBAR1Q8TDU6 330 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 JPH3Q8WXH2 748 aaPredicted RBP20.41■□□□□ 0.86
VRK2-201ENST00000340157 KIR3DX1Q9H7L2 352 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 SIT1Q9Y3P8 196 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 HEBP2Q9Y5Z4 205 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 ANGPT2O15123 496 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 SH3BGRLO75368 114 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 EEDO75530 441 aaKnown RBP20.41■□□□□ 0.86
VRK2-201ENST00000340157 WNT1P04628 370 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 RPS13P62277 151 aaKnown RBP20.41■□□□□ 0.86
VRK2-201ENST00000340157 PAGE2BQ5JRK9 111 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 CACHD1Q5VU97 1274 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 VN1R5Q7Z5H4 357 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 C17orf64Q86WR6 236 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 CAMKK1Q8N5S9 505 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 ABHD11Q8NFV4 315 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 OR2A1Q8NGT9 310 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 SH3KBP1Q96B97 665 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 CCDC124Q96CT7 223 aaKnown RBP20.41■□□□□ 0.86
VRK2-201ENST00000340157 GPATCH1Q9BRR8 931 aaKnown RBP20.41■□□□□ 0.86
VRK2-201ENST00000340157 TMED5Q9Y3A6 229 aa20.41■□□□□ 0.86
VRK2-201ENST00000340157 CACNA1IQ9P0X4 2223 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 IGKV1-8A0A0C4DH67 115 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 CCDC154A6NI56 674 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 PRICKLE3O43900 615 aaPredicted RBP20.4■□□□□ 0.86
VRK2-201ENST00000340157 NDUFS2O75306 463 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 TNFP01375 233 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 F3P13726 295 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 ACPPP15309 386 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 CD27P26842 260 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 PEBP1P30086 187 aaKnown RBP20.4■□□□□ 0.86
VRK2-201ENST00000340157 SLC19A1P41440 591 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 DGKQP52824 942 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 SF1Q15637 639 aaKnown RBP20.4■□□□□ 0.86
VRK2-201ENST00000340157 ZNF423Q2M1K9 1284 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 NOXRED1Q6NXP6 359 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 ROPN1LQ96C74 230 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 REPS1Q96D71 796 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 RAB11FIP5Q9BXF6 653 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 PCBD2Q9H0N5 130 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 PELI2Q9HAT8 420 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 DMRT3Q9NQL9 472 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 AASDHPPTQ9NRN7 309 aa20.4■□□□□ 0.86
VRK2-201ENST00000340157 TRBV23OR9-2A0A075B6M9 112 aa20.39■□□□□ 0.86
VRK2-201ENST00000340157 LAPTM5Q13571 262 aa20.39■□□□□ 0.86
VRK2-201ENST00000340157 RAB42Q8N4Z0 105 aa20.39■□□□□ 0.86
VRK2-201ENST00000340157 PCYOX1LQ8NBM8 494 aa20.39■□□□□ 0.86
VRK2-201ENST00000340157 KLHDC7BQ96G42 594 aa20.39■□□□□ 0.86
VRK2-201ENST00000340157 EGLN2Q96KS0 407 aa20.39■□□□□ 0.86
VRK2-201ENST00000340157 EBPLQ9BY08 206 aa20.39■□□□□ 0.86
VRK2-201ENST00000340157 CLMPQ9H6B4 373 aa20.39■□□□□ 0.86
VRK2-201ENST00000340157 IL1RL2Q9HB29 575 aa20.39■□□□□ 0.86
VRK2-201ENST00000340157 CROTQ9UKG9 612 aa20.39■□□□□ 0.86
VRK2-201ENST00000340157 POMPQ9Y244 141 aa20.39■□□□□ 0.86
VRK2-201ENST00000340157 COLEC10Q9Y6Z7 277 aa20.39■□□□□ 0.86
VRK2-201ENST00000340157 TP53BP1Q12888 1972 aaPredicted RBP20.39■□□□□ 0.85
VRK2-201ENST00000340157 A0A1W2PR77 199 aa20.39■□□□□ 0.85
VRK2-201ENST00000340157 FOXE1O00358 373 aaPredicted RBP20.39■□□□□ 0.85
VRK2-201ENST00000340157 MAOBP27338 520 aa20.39■□□□□ 0.85
VRK2-201ENST00000340157 HNRNPH1P31943 449 aaKnown RBP20.39■□□□□ 0.85
VRK2-201ENST00000340157 ACTR3P61158 418 aa20.39■□□□□ 0.85
VRK2-201ENST00000340157 RAE1P78406 368 aaKnown RBP20.39■□□□□ 0.85
VRK2-201ENST00000340157 DMWDQ09019 674 aa20.39■□□□□ 0.85
VRK2-201ENST00000340157 ILF3Q12906 894 aaKnown RBP eCLIP20.39■□□□□ 0.85
VRK2-201ENST00000340157 TRMT5Q32P41 509 aaKnown RBP20.39■□□□□ 0.85
VRK2-201ENST00000340157 C1orf146Q5VVC0 180 aa20.39■□□□□ 0.85
VRK2-201ENST00000340157 ICE2Q659A1 982 aa20.39■□□□□ 0.85
VRK2-201ENST00000340157 SFTPA2Q8IWL1 248 aa20.39■□□□□ 0.85
VRK2-201ENST00000340157 PHACTR4Q8IZ21 702 aa20.39■□□□□ 0.85
VRK2-201ENST00000340157 RNF148Q8N7C7 305 aa20.39■□□□□ 0.85
VRK2-201ENST00000340157 CADM4Q8NFZ8 388 aa20.39■□□□□ 0.85
VRK2-201ENST00000340157 OR4K1Q8NGD4 311 aa20.39■□□□□ 0.85
VRK2-201ENST00000340157 TSSK3Q96PN8 268 aa20.39■□□□□ 0.85
VRK2-201ENST00000340157 DPY30Q9C005 99 aa20.39■□□□□ 0.85
VRK2-201ENST00000340157 SPHK1Q9NYA1 384 aa20.39■□□□□ 0.85
VRK2-201ENST00000340157 SLAMF8Q9P0V8 285 aa20.39■□□□□ 0.85
VRK2-201ENST00000340157 TSC22D4Q9Y3Q8 395 aa20.39■□□□□ 0.85
VRK2-201ENST00000340157 H7BY64 318 aa20.38■□□□□ 0.85
VRK2-201ENST00000340157 CIB2O75838 187 aa20.38■□□□□ 0.85
VRK2-201ENST00000340157 TBX6O95947 436 aaPredicted RBP20.38■□□□□ 0.85
VRK2-201ENST00000340157 PRPS2P11908 318 aa20.38■□□□□ 0.85
VRK2-201ENST00000340157 BCKDHBP21953 392 aa20.38■□□□□ 0.85
VRK2-201ENST00000340157 CXCL12P48061 93 aa20.38■□□□□ 0.85
VRK2-201ENST00000340157 CLDN8P56748 225 aa20.38■□□□□ 0.85
VRK2-201ENST00000340157 RPL6Q02878 288 aaKnown RBP20.38■□□□□ 0.85
VRK2-201ENST00000340157 PRDX1Q06830 199 aaKnown RBP20.38■□□□□ 0.85
VRK2-201ENST00000340157 HIST2H2ACQ16777 129 aaPredicted RBP20.38■□□□□ 0.85
VRK2-201ENST00000340157 HIST2H2AA3Q6FI13 130 aa20.38■□□□□ 0.85
VRK2-201ENST00000340157 SLC2A7Q6PXP3 512 aa20.38■□□□□ 0.85
VRK2-201ENST00000340157 TMIGD1Q6UXZ0 262 aa20.38■□□□□ 0.85
VRK2-201ENST00000340157 FAM20CQ8IXL6 584 aa20.38■□□□□ 0.85
VRK2-201ENST00000340157 CHTF18Q8WVB6 975 aa20.38■□□□□ 0.85
VRK2-201ENST00000340157 PATE1Q8WXA2 126 aa20.38■□□□□ 0.85
VRK2-201ENST00000340157 PRAP1Q96NZ9 151 aa20.38■□□□□ 0.85
VRK2-201ENST00000340157 PCED1AQ9H1Q7 454 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms